Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1269 ATGTCTGAAAACGGAGAAGAGAAATTACTCGCTATGGCACGTCACATAGCAAAAACGCTAGGCCATAACAACAATGTTATGGCTGATGACATTCTCCAAATATTCTCGAATTTCGATGGAAGATTCTCGAAGGAAAATCTTTCCGAGAAAGTCGCGGTTGCAGATACAGATCCCAGAACCTGCGCCGCACTGGATCACTGCCTCAAAGCCCTCGACCGTCGGATCTCTCACTACGTCTCCTCCGATCACCCTATCTGGGCGGATTCCGCTGACGCCGAGGCTTTCCTCGAAGCCGTTGACGACCTAATCGCCTCCGTCGCAGAGTGGAACCACCTCACCGCGGATAAATCCATCGCAACGTGTCTTGCACGCGCTGAGGATATGCTCCAGCACGCTATGTTCCGTCTTGAGGACGAGTTTCGCTCTCTCATGGAACGCGGTGGTGAGTCGTTTGACCTAACTGAGAATTTACCGTTTGAATCGGAAGAAGAAGATGAAGAAGTTAGGGACGGTGAAGAAGAAGAGGATCTAATTCCTGTTGCCATGCCGGTAACCGATTACGACATCGTGATTGATGCTTTGCCGTCGGCGACGATTAACGACCTTCACGAGATCGCAAAGCGAATGGTTGCTGGTAGTTTTGGAAAGGAATGTTCGCATGTTTACAGTAGTTGCCGGAGGGAGTTTTTGGAGGAAAGCCTCTCGAGATTAGGGTTACAGAAGCTTAGTATCGAGGATGTTCAGAAGATGCCATGGCAGGATATCGAAGATGAGATTGAAAGATGGATTAAAGCTTCCAATGTCGCTCTCAAGATACTTTTTCCCAGCGAGCGACGACTCTGTGATCGCATCTTCTTCGGATTCTCCTCCGCCGCGGATTTCTCCTTCATGGAGGTTTGCAGAGGATCCACCGTTCAGATGTTGAATTTTGCTGACGCTGTTGCCATCGGAAGCCGTTCGCCTGATCGGTTATTCAGAATCCTCGACGTGTTTGAAACATTGCGTGACCTAATTCCAGAATTTGAGGTTTTATTTTGTGATCAGTATAGCTTGTCTTTAAGGAATGAAGCATTGACGATATGGAAGAGGTTAGGGGAAGCAATTAGAGGCATTTTTATGGAATTGGAGAATCTAATTCGCCGAGATCCGGCTAAGGCGGCAGTTCCTGGTGGTGGACTTCACCCGATTACCCGATATGTGATGAACTACCTCCGTGCTGCGTGTCGGTCGCAGCAGACATTAGAGCAAGTGTTTGAAGACTATGGACATCCACTAAAGGAATTTCCGAAAATTGATGATAGAATGCATTCATCTTCCTCTTTGTCAGTGCAAATGGATTGGATTATGGAGCTATTAGAAAGCAATTTGGAAGCCAAATCCAGAATCTATAAGGACCCTGCTTTGTGCTATGTTTTCTTGATAAATAACTGCAAGTACATTGTTCAAAAGGCTGAAGATAGTGAATTAGGAGCACTTTTAGGAGATGATTGGATCAAAAAACACACTGCGAAAATTCGGCAGTATCTTATGCAGTATCAAAGAAGCTCATGGAACAAGGTGTTTGGGTTTCTAAAGATGGAGAACAGTGACTCAATACCACCTAATGCCATAGCAAAGTCTATGAAAGAGAAGCTGAAATCGTTCAACATGGTGTTTGATGAGTTATGCAGGGTTCAATCTTCATGGTTTATCTTTGACGAACAGCTTAAGGAAGAAATAAGAATTTCTATTGAGAAACTGTTGTTACCAGCTTATAGGAAATTCATTGGGAGGTTTCAGAGTGTTGCTGAAGTTGGTAAGAATACTGATAAGTATGTTAAATACGAAACAGAGGATATTGAAGTGAAACTCAACGATTTGTTTCAAGGAAGCAGTGGATCAACTGGTAGCAGAAAACGCAGCTAG 1905 0.4467 MSENGEEKLLAMARHIAKTLGHNNNVMADDILQIFSNFDGRFSKENLSEKVAVADTDPRTCAALDHCLKALDRRISHYVSSDHPIWADSADAEAFLEAVDDLIASVAEWNHLTADKSIATCLARAEDMLQHAMFRLEDEFRSLMERGGESFDLTENLPFESEEEDEEVRDGEEEEDLIPVAMPVTDYDIVIDALPSATINDLHEIAKRMVAGSFGKECSHVYSSCRREFLEESLSRLGLQKLSIEDVQKMPWQDIEDEIERWIKASNVALKILFPSERRLCDRIFFGFSSAADFSFMEVCRGSTVQMLNFADAVAIGSRSPDRLFRILDVFETLRDLIPEFEVLFCDQYSLSLRNEALTIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSQQTLEQVFEDYGHPLKEFPKIDDRMHSSSSLSVQMDWIMELLESNLEAKSRIYKDPALCYVFLINNCKYIVQKAEDSELGALLGDDWIKKHTAKIRQYLMQYQRSSWNKVFGFLKMENSDSIPPNAIAKSMKEKLKSFNMVFDELCRVQSSWFIFDEQLKEEIRISIEKLLLPAYRKFIGRFQSVAEVGKNTDKYVKYETEDIEVKLNDLFQGSSGSTGSRKRS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1269 634 Gene3D Exocyst complex component Exo70 84 631 - -
Psa2g1269 634 Pfam Exo70 exocyst complex subunit 260 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa2g1269 634 SUPERFAMILY Cullin repeat-like 86 621 IPR016159 -
Psa2g1269 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 622 IPR004140 GO:0000145|GO:0006887
Psa2g1269 634 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1269 Psa-Chr2 96819475 96822755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1269 1 625 EXO70 exocyst subunit family AT5G58430 67.508 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1269 K07195 - gmx:100803694 978.393