Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1268 ATGACACATATTCTATTCCAAATTTGGATATGGGTGATGCAGCCAAAGGTGTGGAGATTTGTAACCTTTGCTTCCGCTGTTGTAGGAATGCTCTTTTATGCTCTCAGTTCTTCCTTCAACTATCTCTTTGGAAATTGGAATGTGTTGAAGATTATAAATAGAGTCCTTGATGTGTTTGAAACAATGCGTGACCTTATTCCAGAGCTTGAGTTTCTGCAAAATGAAACAACTACAATTTGGAAGAGATTGGGGGAAGCAATCAGAGGCATTTTCATGGAGTTAGAGAATGGAATACGCCAAGATCCTCAAAAGGAAGCAGTTTCTGGTGGCTTTGTTTATCCACTATGA 348 0.3908 MTHILFQIWIWVMQPKVWRFVTFASAVVGMLFYALSSSFNYLFGNWNVLKIINRVLDVFETMRDLIPELEFLQNETTTIWKRLGEAIRGIFMELENGIRQDPQKEAVSGGFVYPL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1268 115 Gene3D Exocyst complex component Exo70 12 115 - -
Psa2g1268 115 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 114 IPR004140 GO:0000145|GO:0006887
Psa2g1268 115 SUPERFAMILY Cullin repeat-like 19 115 IPR016159 -
Psa2g1268 115 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 54 114 - -
Psa2g1268 115 Pfam Exo70 exocyst complex subunit 51 115 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1268 Psa-Chr2 96811014 96812426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1268 54 115 EXO70 exocyst subunit family AT5G58430 64.789 4.22e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1268 K07195 - mtr:MTR_5g073810 89.3521