Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1258 ATGATGCATATTCTAACCCAAATTTGGAGACTAGTGTTGCAGCCAAAGGTGTGGAGATTTGTAGGCTTTGCTTCAGCCGTTGTTGGGCTTCTCTGTTATGCTCTCAGCTCTTCTTTCAACCACCTATTTGGAAATTGGAATTTGTTCAAGATAATTCTTTACACTCTTTTCAGCTTCATCATCAGCCTCCTGATTTTGTATGCAAATATTTGGAAGTCATCTACAAGTCTCCGATTCAAAGCTCATACAGCTTTCCTCGTATTGACAATCACTTCTGTCTATTCCTTTTTCTTTGACAAAGTTGTGAATGGCAAACCTGGTGCATACAGTCTCATTTCATGTGCTTCCTTTGCTATCATGTCACTCAGTTTGTCGCGGCAAACTCATTGCGGAGTTGAAATTGATCTTCTCTACTTCTTCCTCGGATGTCTAATTGTGCAGCTCATGAAGATTAGCTTGCAGTTACTCATTCTTGGAGCAGGTTTCAGCTACTCCCTTATTACTCTTCGTTCTTCAGTCTCTTCAATAGAAGATGGAATAGAAAACGTATATTTTGACCTGCAAGGTGAAAATTCAGTTGTCCTTGAAATGGATTCATTACTATTGCAACAGCTTAAAACTTGTATGAAGGAAATTGAAGAGGAGAATTTGAATCTCATAGACAGGCTTATGGAGCTCGTGAAGGAATACAATCTAGATAAGAGTGAATTACATTTACTTGGTAAGTGTGATTATGTAATGGATACTCTGTCGTCAAGAAAGATCCATAATCTTAATGAATGTGTGAAGTTGATGGTAGCAGCTGGTTATAAGAAAGAGTGCTATGATGTGTATAGCAGTTGGCGCAGGGTATTCTTTCAGGTGTGTCTCAAAAATGAAATATTTGGGTTGCCAACGGAAAACATCAATACCATCCATGAGAATGAAAGAGATAAATATTTAGATACTATGTTTGAAAGATGGATGACTGCTTTTGATGTAGCTATGATAATCTTGTTTCCCATTGAGCAGAAACTCTGTAATCGTGTCTTCTTGGGGTTTTCCTCGGCGGCTTCTAGTTGCTTCTTTGAGGTTTGCAAAGAAGCAACGTCTTATCTGCTGTGTTTTGCAGATACGATTTCTTCTGGGAGCCCTACAAAATGGCGTTTGTCCAAAATGCTTCAAATATTCGGGCATTTGGGTAAGCATATTCCGAAATTCCAATCTCTTTTCCCGGACTCGACATTACTGAACGAAGCAATTGCAGTTAAGAATAGATTAGGAGAAGGTAGCAGGGACCTTTTCTTGGAAATGCCTAATGTTATTTTCGGAGTTCCTGCAGCAAAGGAAACTGTTCTGACTCATGGTCTTCATCGAATTACTTTTGAGGTCATGAGCTACATGTCTCTTGCTTGCATGTCGCGGAAAGAGTTGGAACAAATTTTACAAGCATACCCCAAGGTTGATAATGAAGTGGAAGCATCTTCTTTTTTCTTGAAGCAGATGGAGCAGATAATGGAGATGTTACCTAAAAAATTGATGGCCAAGTTGAAAAATTGCAAGGACCCTGCTTTGCGCCATATTTTAATGGTAAATAATAGGAGCCACATAGAAGCTATAAATCAATACTCAGAATTAGAAACTATTTTTGGCAATGATTGGTTCCAAAATAACAAAGCAAAAATTCGACAAAACATTGAACTTTATAAGAGAACTTCGTGGAATAAGGTGTTGGACTTTCTGAAGCTGAACGACAATGACAACATTTCAGAAGATTTATTGAAAGAGAAGATCCATTTGTTCAACAGTCACTTTGAAGAGATATGCAGAGTTCAGTCCAATTGGTTTGTTTATGACAGTAAGCTAAGGGAAGAAATAATATCATCTGTGGAAAATATGTTGCTTCCGGCATATGGAATCTTCATTGGGAAGCTTCAGGATATTCTTGTTGTGCAGAACTTTTGCTCTGTGTTTATGGATCGCACCATTAACTAG 1974 0.3825 MMHILTQIWRLVLQPKVWRFVGFASAVVGLLCYALSSSFNHLFGNWNLFKIILYTLFSFIISLLILYANIWKSSTSLRFKAHTAFLVLTITSVYSFFFDKVVNGKPGAYSLISCASFAIMSLSLSRQTHCGVEIDLLYFFLGCLIVQLMKISLQLLILGAGFSYSLITLRSSVSSIEDGIENVYFDLQGENSVVLEMDSLLLQQLKTCMKEIEEENLNLIDRLMELVKEYNLDKSELHLLGKCDYVMDTLSSRKIHNLNECVKLMVAAGYKKECYDVYSSWRRVFFQVCLKNEIFGLPTENINTIHENERDKYLDTMFERWMTAFDVAMIILFPIEQKLCNRVFLGFSSAASSCFFEVCKEATSYLLCFADTISSGSPTKWRLSKMLQIFGHLGKHIPKFQSLFPDSTLLNEAIAVKNRLGEGSRDLFLEMPNVIFGVPAAKETVLTHGLHRITFEVMSYMSLACMSRKELEQILQAYPKVDNEVEASSFFLKQMEQIMEMLPKKLMAKLKNCKDPALRHILMVNNRSHIEAINQYSELETIFGNDWFQNNKAKIRQNIELYKRTSWNKVLDFLKLNDNDNISEDLLKEKIHLFNSHFEEICRVQSNWFVYDSKLREEIISSVENMLLPAYGIFIGKLQDILVVQNFCSVFMDRTIN* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1258 657 Gene3D Exocyst complex component Exo70 172 646 - -
Psa2g1258 657 Pfam Exo70 exocyst complex subunit 319 641 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa2g1258 657 SUPERFAMILY Cullin repeat-like 205 639 IPR016159 -
Psa2g1258 657 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 642 IPR004140 GO:0000145|GO:0006887
Psa2g1258 657 PANTHER PROTEIN, PUTATIVE-RELATED 13 642 - -
Psa2g1258 657 Coils Coil 202 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1258 Psa-Chr2 96479715 96481979 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1258 244 641 EXO70 exocyst subunit family AT5G58430 40.594 3.78e-84 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1258 - - mtr:MTR_5g074130 676.781