Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1257 ATGAAGATTAAATTACAGTTATTTATTGTTGGAGCAGCTTTCAGCTACTCCCTTATTATTCTCCGTTCTTCATTTTCTTCAATAGACGCTGAAGCAAATAATCCGCACTCTGACCTCCAAGATGGAAATTCGGTGGTTCTTTCTATGGATTCTCTACAACTCGCCAATACTGATATTGCTAGTGCTAGCAATAACAGTAGCATCGGTTCGCCACAATCGGTGTTCACCACTAATATCAGTAGTATGATGGAACAACTCCAGACTTTTGTGACGGCACTTAGGCAAGAAAATTCAGGTTTCATTCAAATGCTTTTGGATCATGTAAAAAATTATGTTGAAGAATACTCTGAATGGAGGGTGACCGATCCTAACTACTTGATGGATGCACTAAAGCCAGAAACCATCAAAGGCCTTGAGGAAATAGCAAAGGTTATGATGAACGCTGGGTTTGAGAAAGATTTTTCCGAAGTGTACATCAATTGCCGTAGGGAATGCTTAAATGAGTGCCTAATGCATAGACTATTCGGGTTACAGAAGCTCAGCGTCGAGGAGGTTCAAAATCTGCCGTGGGACATCCTGGAAGCCCAAATTGAGAAATGGATTAAGACTTTCAATGTCGCTCTCAAGATACTCTTTCCTGGCGAGCGACGACTCTGTGATCGCATTTTCTTTGGATCCTCATTGGCAGCTGATTTTTCCTTCATGGAGATTTGCAGGGGATACACCGTTCAGCTTCTCAATTTTTCTGAATTCATCACCACTGGAAGTCGTTCCCCAGAGCGTTTGTTTAAGATGCTGGAGGTGTTAGAAACACTGCGTCACCTAATTCCAGAAATCGAGTCGTTATTTTGTGATGAGTACAGTGCATCTCTAAGGAATGAAGCAAATACCATATGGAAGAGATTGGAGGAAGCAATCAGAGGCATATTCATTGAGTTGGAGGATCTAATTGACAGTCCCTCACTTTATGGGCAGAAGCCTAGGAATATAGACGAATTGGAGTTCAATTTGAATGCAAAGTCCAAATTCTACGATGGCTCTTCTTTAGGTGATATTTTTTTGATGAATAATGACACATACATAGTCCCAATTACAAAAGAAAATGAACTAGAAACCCTTTTGGGGAAAGATTGGATCCTACAATATGCTCTGAAAGTTTGGCACAACAACGGACAATATAAAATGGGCACTATCACACCCGAATTAGACCATGAGGTGTATGTGAAAGATTCCGAAGCATCACCGTCGCAACCGCGAGCAAGGCGGAGGAAAACAGTTCAAAAGATAAGATTGAGAACATTAGTGATATCTCCCGCACCACAGTTTGAACACACAAATAAAGTGCCACAAGACGTGTTTACATGGAGAAAATATGGAATGAAAGAGATATTGGGCTACAAATACCCTAGGAATTACTACAGATGCCGCTACAGGAAACTACTTGAATGTAAAGCCACGAAGCAAGTTCAACAACTTAGTGAAATTCCAGAAGTGTTTGAAGTAATATACAATAATTTACATTTCTGCAAAAGTCCCTTAATAGGACCAGCTCCACAACTAGTGAACTTCTCAAAGGATATGTCAACCACCATGTCTCCATCACCAACGTCATTTCATGAGTGGCTGTCATCGGGGCCACAAGTCAATTCCATAAACTCTATACCAGTGGTCAAGCTAGCTGCTCCTGCAGACGGCGGGTATCATCCTATGATGGAAAGCCTCGTATGCCATCTTGTTCCTATCATAAAATCACAGGAGATGAACATAGTTAATGGAGACGGAGCACTTTCACTTTCAGCACAAACAGAGGGGACAGTGGAGCTGTTAGAGAGCATTCTGGCATCCAACTCCGAAAAACATGTGGACCCTTCTTTGCGTCATTTTTTCATGATGAATAACTGGAGATATTTAGAAGTGACAAACCAAAGAAAGGAATTGGATGTAATTTTTGGCAATGTTTGGTTCCGAAAAAACAGAGAAAAAGTCCAACAAAACTATGAATTCTATCGAAGATACTCGTGGGATAAGGTGTTGGAATTTTTGAAGTTGGATATCAATAACTCTATGGAAATTAGTATAGCAGCAGGTTCGATGAAAGAAAAGCTCAGTTTGTTTAACATGCACTTTAATGAGACATGCAAAGTTCAGTGCACATGGTCTGTTTATGATGAAAAACTAAGGGAAGAAATAATTGCATCTCTCAAAAACATCTTGCTACCAGCATATGGAATCTTCATAGGGAAGTTTCAAGATATTGTTACAAACAATGCTTATGAGTATATTGAGTATGGAATGTTCGACATTAATGATATGCTTGATAATTTGTTTCTCGGAAACAAGAAAGACAATTGA 2352 0.3984 MKIKLQLFIVGAAFSYSLIILRSSFSSIDAEANNPHSDLQDGNSVVLSMDSLQLANTDIASASNNSSIGSPQSVFTTNISSMMEQLQTFVTALRQENSGFIQMLLDHVKNYVEEYSEWRVTDPNYLMDALKPETIKGLEEIAKVMMNAGFEKDFSEVYINCRRECLNECLMHRLFGLQKLSVEEVQNLPWDILEAQIEKWIKTFNVALKILFPGERRLCDRIFFGSSLAADFSFMEICRGYTVQLLNFSEFITTGSRSPERLFKMLEVLETLRHLIPEIESLFCDEYSASLRNEANTIWKRLEEAIRGIFIELEDLIDSPSLYGQKPRNIDELEFNLNAKSKFYDGSSLGDIFLMNNDTYIVPITKENELETLLGKDWILQYALKVWHNNGQYKMGTITPELDHEVYVKDSEASPSQPRARRRKTVQKIRLRTLVISPAPQFEHTNKVPQDVFTWRKYGMKEILGYKYPRNYYRCRYRKLLECKATKQVQQLSEIPEVFEVIYNNLHFCKSPLIGPAPQLVNFSKDMSTTMSPSPTSFHEWLSSGPQVNSINSIPVVKLAAPADGGYHPMMESLVCHLVPIIKSQEMNIVNGDGALSLSAQTEGTVELLESILASNSEKHVDPSLRHFFMMNNWRYLEVTNQRKELDVIFGNVWFRKNREKVQQNYEFYRRYSWDKVLEFLKLDINNSMEISIAAGSMKEKLSLFNMHFNETCKVQCTWSVYDEKLREEIIASLKNILLPAYGIFIGKFQDIVTNNAYEYIEYGMFDINDMLDNLFLGNKKDN* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1257 783 Gene3D WRKY domain 437 513 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1257 783 SMART WRKY_cls 449 511 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1257 783 Pfam WRKY DNA -binding domain 450 510 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1257 783 SUPERFAMILY WRKY DNA-binding domain 445 512 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1257 783 Pfam Exo70 exocyst complex subunit 199 319 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa2g1257 783 Pfam Exo70 exocyst complex subunit 330 393 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa2g1257 783 Pfam Exo70 exocyst complex subunit 583 773 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa2g1257 783 Gene3D Exocyst complex component Exo70 321 432 - -
Psa2g1257 783 Gene3D Exocyst complex component Exo70 549 783 - -
Psa2g1257 783 Gene3D Exocyst complex component Exo70 43 320 - -
Psa2g1257 783 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 319 - -
Psa2g1257 783 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 331 394 - -
Psa2g1257 783 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 568 776 - -
Psa2g1257 783 ProSiteProfiles WRKY domain profile. 444 512 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1257 783 SUPERFAMILY Cullin repeat-like 82 390 IPR016159 -
Psa2g1257 783 SUPERFAMILY Cullin repeat-like 581 776 IPR016159 -
Psa2g1257 783 PANTHER EXOCYST COMPLEX PROTEIN EXO70 568 776 IPR004140 GO:0000145|GO:0006887
Psa2g1257 783 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 319 IPR004140 GO:0000145|GO:0006887
Psa2g1257 783 PANTHER EXOCYST COMPLEX PROTEIN EXO70 331 394 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1257 Psa-Chr2 96319710 96374282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1257 557 779 EXO70 exocyst subunit family AT5G58430 39.056 1.09e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa2g1257 Exo70 5.6e-40 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1257 K07195 - cam:101500706 798.89