Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1254 ATGAGATACATTTCATCCCTTAGAAGTCCAAAGAAAGAAGAACATGAAGTACCAGAAGCTATCACTCCAATACTACCTCCAAACTTCAACAAACCTTACATCAATGAAGATTTCTATCTCTTCGATGAGCTCGAAGAGTACTTGAACATCGAAGAAGAAGAACAAAATTCATCACCACAAAACACATGTAACAGTAGTAATGAGCTTCATTGGGATTTCATGGAATGGAATGAGTTTCCATTTAATGAAAGGAAAGATGATAACATAAGCAAATGCAATTTTGAGTTGAAGAGAGAAATTTACAATGATGGATTTTGGGAAGTGGATGATGAAAATTGTGTTGCTTTGAAATTGAATTTGAATTTGAATTATCAAGATGTTTTGGATGCATGGTCTGACCGGGGCTCTCCTTGGGCTGATGATTGTTCTCTTTCATTGTCTTCCTCCAATAATTGCTCCTATATGGGAGAAGTGCCAATATTGGAAGAAGAGAGACCAAGAAGAGAAGCAAGTGTTCTGAGGTACAAAGAGAAACGTCAGAACAGATTGTTCTCTAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 636 0.3695 MRYISSLRSPKKEEHEVPEAITPILPPNFNKPYINEDFYLFDELEEYLNIEEEEQNSSPQNTCNSSNELHWDFMEWNEFPFNERKDDNISKCNFELKREIYNDGFWEVDDENCVALKLNLNLNYQDVLDAWSDRGSPWADDCSLSLSSSNNCSYMGEVPILEEERPRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1254 211 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 4 211 - -
Psa2g1254 211 PANTHER CCT MOTIF FAMILY PROTEIN 4 211 - -
Psa2g1254 211 ProSiteProfiles CCT domain profile. 168 210 IPR010402 GO:0005515
Psa2g1254 211 Pfam CCT motif 168 210 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1254 Psa-Chr2 96225535 96227308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1254 118 210 C2C2-CO-like Transcription Factor Family AT1G73870 47.368 2.60e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa2g1254 CCT 2.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1254 - - cam:101495184 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1254 2 96225535 96227308 Psa2g1254 2 96225535 96227308 ECH