Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1244 ATGGCTACAGAAGCGAGAGCGAAGTTCCAAAACCCAGATTACCGACCCGATTTTCACCCAGAAAACACCTTGACGCCGTCGTCAACTCACGATGGTCTTCACTTCTGGCAGTTAATGATTGCCGGATCCGTCGCCGGTTGCATCGAACACATGGCAATGTTTCCCGTCGACACCGTTAAAACTCATATGCAAGCAATTACTTCTTGTCCGATTAAAGCGGTTTCCCTTCGTCAAGCTGTTCGTTCGATTCTCCAAACGGAAGGTCCCTCCGCCTTATACCGCGGTATCGGCGCAATGGGGCTTGGAGCGGGACCGGCACACGCTGTTTATTTCTCGGTTTATGAAACTTGTAAAAAACGGTTTTCGCAAGGGAACCCTAATAATTCTGTTGCTCATGCTGCTTCTGGTGTTTGTGCTACCATTGCTAGTGACGCGGTTTTTACGCCGATGGATATGGTGAAACAGAGGTTGCAGTTGAGTAAGAGTGCTTACAAGGGGGTTTTTGATTGTGTGAAGAGGGTTTTGAGTGAGGAAGGGTTTGGGGCTTTTTATGCTTCGTATAGGACTACAGTTTTGATGAATGCGCCTTTTACGGCTGTGCATTTTGCTACTTATGAGGCGGCAAAACGGGGATTGAATGAGGTTTCTCCGGAGAGTGCGGATGATGAACGGCTGATTGTTCATGCTACGGCTGGGGCGGCCGCTGGTGGTTTGGCTGCTGCTGTTACAACGCCACTTGATGTTGTTAAAACTCAACTGCAATGTCAGGGTGTGTGTGGATGTGATAGGTTCAAAAATGGTTCAATTGGCGGTGTTATTAAAACAATACTGAAAAAAGACGGATACAGAGGGCTCATGCGAGGGTGGGTTCCAAGAATGCTCTTTCATGCTCCTGCAGCCGCTATTTGCTGGTCAACATATGAAGCTGGAAAGTCCTTTTTCCAAGATTACAACGAGCAGAAAGATAGCGGAACCGTCACCTAA 984 0.4787 MATEARAKFQNPDYRPDFHPENTLTPSSTHDGLHFWQLMIAGSVAGCIEHMAMFPVDTVKTHMQAITSCPIKAVSLRQAVRSILQTEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKRFSQGNPNNSVAHAASGVCATIASDAVFTPMDMVKQRLQLSKSAYKGVFDCVKRVLSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEVSPESADDERLIVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKNGSIGGVIKTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQKDSGTVT* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1244 327 PANTHER MITOFERRIN-1-RELATED 1 322 - -
Psa2g1244 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 211 IPR018108 -
Psa2g1244 327 Pfam Mitochondrial carrier protein 128 214 IPR018108 -
Psa2g1244 327 Pfam Mitochondrial carrier protein 224 317 IPR018108 -
Psa2g1244 327 Pfam Mitochondrial carrier protein 33 123 IPR018108 -
Psa2g1244 327 Gene3D Mitochondrial carrier domain 128 327 IPR023395 -
Psa2g1244 327 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Psa2g1244 327 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Psa2g1244 327 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Psa2g1244 327 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Psa2g1244 327 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Psa2g1244 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 120 IPR018108 -
Psa2g1244 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 313 IPR018108 -
Psa2g1244 327 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 322 - -
Psa2g1244 327 SUPERFAMILY Mitochondrial carrier 31 308 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1244 Psa-Chr2 95881243 95885370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1244 134 323 Chloroplast and Mitochondria Gene Families AT1G07030 26.768 7.87e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1244 K15113 - gmx:100802640 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1244 2 95881243 95885370 Psa2g1244 2 95881243 95885370 ECH