Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1219 ATGGTGACTTTGGTCTCATTATTGATCCCTTCCAATGCATTGCTCACTCCTCATTTTTATGATAAAGTTTGCCCTCAAGCATTACCAGTCATAAACTCAGTTGTTAAGCAAGCAATTCTTAGGGAAAAACGCATTGGAGCATCACTCCTACGCCTGCATTTCCATGATTGCTTTGTTAATTTGGGAGGTCCACAACTTTTCTACAATGTGTTATTGGGAAGAAGAGATGCAAGAACAGCAAGCAAATCAGCTGCAAACACAAATCTCCCACCTCCAACATTCAGCTTCTCACAGCTTATTTCCAACTTCAAATCTCATGGATTAAATGTAAAAGACCTCGTAGCACTTTCTGGTGGCCACACTATTGGATTTGCAAAGTGCAGAACATTTAGAAACAGAATCTACAATGAAACAAACATTGAGCCTGGTTTTGCAGCATCTTTAAGAAAAACATGTCCTAGAAAAGGTGGTGACAACAATTTAACACCACTAGATTCCACTCCTACAAAAGTTGACACAACATATTATAGAGATTTGATATACAAAAAGGGTCTTCTTCATTCTGATCAACAATTGTTTGAGGGAAAAGGTAGAGAAAGTGACAAATTGGTGCAACTTTATAGTAAGAGTCCTTTGGCTTTTGCTAGAGATTTTAAGAGTTCATTGATCAAGATGGGGAACATCAAGCCTCTTACAGGGACACAAGGTGAGATCCGAATCAATTGCAGAAGGGTTAGATAA 741 0.3846 MVTLVSLLIPSNALLTPHFYDKVCPQALPVINSVVKQAILREKRIGASLLRLHFHDCFVNLGGPQLFYNVLLGRRDARTASKSAANTNLPPPTFSFSQLISNFKSHGLNVKDLVALSGGHTIGFAKCRTFRNRIYNETNIEPGFAASLRKTCPRKGGDNNLTPLDSTPTKVDTTYYRDLIYKKGLLHSDQQLFEGKGRESDKLVQLYSKSPLAFARDFKSSLIKMGNIKPLTGTQGEIRINCRRVR* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1219 246 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 PANTHER CATIONIC PEROXIDASE 61 245 - -
Psa2g1219 246 PANTHER CATIONIC PEROXIDASE 2 60 - -
Psa2g1219 246 Pfam Peroxidase 61 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 CDD secretory_peroxidase 15 245 IPR033905 GO:0004601|GO:0042744
Psa2g1219 246 PANTHER PEROXIDASE 72-RELATED 61 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 PANTHER PEROXIDASE 72-RELATED 2 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 SUPERFAMILY Heme-dependent peroxidases 15 245 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601
Psa2g1219 246 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1219 246 Gene3D Peroxidase, domain 2 90 225 - -
Psa2g1219 246 ProSitePatterns Peroxidases proximal heme-ligand signature. 112 122 IPR019793 -
Psa2g1219 246 Gene3D - 66 243 - -
Psa2g1219 246 Gene3D - 15 61 - -
Psa2g1219 246 ProSiteProfiles Plant heme peroxidase family profile. 47 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1219 Psa-Chr2 93208712 93211978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1219 13 60 Peroxidase AT5G05340 54.167 1.16e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1219 K00430 - gmx:100811170 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1219 2 93208712 93211978 Psa2g1219 2 93208712 93211978 ECH