Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1216 ATGCTTTTGATGATATCTGTCAAGGACTTATATTCAGTTCACATCACAAATGTCAAACAGTATCAAGTAGGAGATAATATTGAGTTCACTTTCTTAACAAGGAAGAAGGATTCATTTACTCTTTCGCATAAAAATAAACAAGAGACTGGTAACTCATCATGTGGCAAAGGAGATGTATGTGACCCATTTTCTAAGTTCAGACTCACATTAGATGTAGATTTCTCAGTGAGGCATGCAATATCAGATCTAGATGGTTGGTTGGCCAGAGCAGATTCAGGTCTTGTCGATGACCTGGAGAAGCTTCCATATGTTAGTGCTGCAATGCAACAACTAAAACAGAGAAAGAAGTATTGGAATGAGTACAGGGCTTCTAACAGTGAAAAGTCTTCTAGCCTAATTGATTATGCACTCCAGGTACCATCAATATCTGCAAATGTTGTGGATACTGATGACAACAATTGTTCTAGTGAATCAAGAACTTCCTCTACTGATTTCCCTGATCAAAGCAAGGTTGTAGCAATGGATAAATCAACTGCTGGATGTTGTCAGGATGAAATTTTGGACCTGGAAAAGTTACTACTTTGTGAGGTTGATTTGAGTGAGATGTTACCTTTTGAGGCACTGTCCCCATTTTTGGATGAAATAAAGAACCGTGCAAGCCAGAGGAAGCAACTTGCAAAGAAGGAACTAAAAGAAAAATTAAATGCTGAAGCTACTTCTAATTATGCTCTTTCCATGTCAACCCACTCTCAGTTTATTTCTCGTGATGATCCTCCCACGTTCTCCCTAGATGACTTTGAAGCTCTAGGAAATCCCACTCTATCATCAAGTCCTCAAGTTGTTGGTGAGAGGAAATTGTTCTCAAGTGTGACTAGGTTTGGTTTTGCTGCTGCTCGTGATTCTCCATCCTTTCAAGCTCAAGAAACTAGTGATTTACATAATAACAATTCAATCGTGGATTCTTCTGGTACACCAGACGTTGGGCAAGGCAATTCTGCGAACTCTCTGCAACAGGCTCCCTTAAGCTCCCTTCAACAAAACAATGTTAGCACTCCTCAACATACCAACATCAATTCATTATCATCACAAGGTGGGGTGAATATGATCCAACCAAATCCACATCGAAGCTGCTGCGACACAAACACACAAAAATCAGTTTAA 1161 0.3962 MLLMISVKDLYSVHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQETGNSSCGKGDVCDPFSKFRLTLDVDFSVRHAISDLDGWLARADSGLVDDLEKLPYVSAAMQQLKQRKKYWNEYRASNSEKSSSLIDYALQVPSISANVVDTDDNNCSSESRTSSTDFPDQSKVVAMDKSTAGCCQDEILDLEKLLLCEVDLSEMLPFEALSPFLDEIKNRASQRKQLAKKELKEKLNAEATSNYALSMSTHSQFISRDDPPTFSLDDFEALGNPTLSSSPQVVGERKLFSSVTRFGFAAARDSPSFQAQETSDLHNNNSIVDSSGTPDVGQGNSANSLQQAPLSSLQQNNVSTPQHTNINSLSSQGGVNMIQPNPHRSCCDTNTQKSV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1216 386 MobiDBLite consensus disorder prediction 367 386 - -
Psa2g1216 386 Coils Coil 216 236 - -
Psa2g1216 386 PANTHER RING FINGER 10 FAMILY MEMBER 4 329 IPR039739 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1216 Psa-Chr2 93023982 93025683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1216 192 309 C3H Transcription Factor Family AT3G26730 50.413 4.29e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1216 - - gmx:100818033 282.722