Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1210 ATGGGAAATAACAAGTTCAAATTTTCAGATATGATACCAAATGCTTGGTTTTACAAGCTAAAAGATATGAGCAAATCATCAAGGAAAAGAAATGGTTCATCACATTTCATGAAGAACAAAGTAATAACTTCACCAACATCAACATCTCAAAGGTCACAACATTCAAGGTATTCTTCACATTGTTTCTCTAATGAACCAATAAGGGTTGGTAAGTTGTTTAACACACCAAATCATACCAAAGATTTGAGCTTTCCATTCAATGATTCACCAAGAATGTCTTCCAAGAGAAGGGTTGGAAGAAAAACTATTTACAAGCCTTCTCATTCTTCTCAACCATTTGATCAAGTTCAAGTTCAAGTTCAAGTTCAATCACAAGAACATGATTTGTCTTCAATTGAAAATTCTTCTTGTGAGTCTTATCATAATCAATGTGTTTCTTCTGAATCTGAATTTTGTGATAGCTTTTCGGTTCCGGATTTGCTTAATTGTAGTTGTAGAGTTAGCTCTTCAACTAATGATATCATCATAGACATGAACAATGAATCTTTTCAAGGAAATTCTAAACACTTAGATGGTTTTGAATCTTTTGATGCATTTTCACAACTTGGTCTAGCTCCTATACTAACAAAGCAAGTGAAGTTCGACGATGATAAGATCGTCGAGGCTACTAAATCACGAAGTTCGTCCGAATCAGACGAGCTGAAAATCGATCATTCCTTCTCCTCTATCAAAGTTAATCAAAGAAGGAGAAAAAAAAGTCAAATAGGTAAAAAAGCTTCTCCTAATTCTTCTCAAGGTATAAGGCTTAGAGTGAATTCTCCAAAGCTTGTTAATAGAAAAATTCAAGCTTGTGGAAGAAAGAGTGTTTCAAGGAATGAGGCAGGGTTTGTAGATGGATTTGCTGTTGTTAAGTCATCAATTGATCCAATAAGTGATTTCAAGGAATCAATGGTGGAGATGATTGTTGAGAATAATATAAGAGGATCAAAGGATTTGGAGAATTTACTTGCTTGCTATCTTTCTCTTAATTCAAGTGAATATCATGATCTTATTGTTAAAGCTTTTGAGCAAATTTGGTATGATATGGCTCAACTTAGAATGTAA 1104 0.3361 MGNNKFKFSDMIPNAWFYKLKDMSKSSRKRNGSSHFMKNKVITSPTSTSQRSQHSRYSSHCFSNEPIRVGKLFNTPNHTKDLSFPFNDSPRMSSKRRVGRKTIYKPSHSSQPFDQVQVQVQVQSQEHDLSSIENSSCESYHNQCVSSESEFCDSFSVPDLLNCSCRVSSSTNDIIIDMNNESFQGNSKHLDGFESFDAFSQLGLAPILTKQVKFDDDKIVEATKSRSSSESDELKIDHSFSSIKVNQRRRKKSQIGKKASPNSSQGIRLRVNSPKLVNRKIQACGRKSVSRNEAGFVDGFAVVKSSIDPISDFKESMVEMIVENNIRGSKDLENLLACYLSLNSSEYHDLIVKAFEQIWYDMAQLRM* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1210 367 Pfam Transcriptional repressor, ovate 306 362 IPR006458 -
Psa2g1210 367 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 300 362 IPR006458 -
Psa2g1210 367 MobiDBLite consensus disorder prediction 36 60 - -
Psa2g1210 367 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 366 - -
Psa2g1210 367 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 366 IPR038933 GO:0045892
Psa2g1210 367 Pfam DNA-binding domain 1 44 IPR025830 GO:0003677
Psa2g1210 367 ProSiteProfiles OVATE domain profile. 302 361 IPR006458 -
Psa2g1210 367 MobiDBLite consensus disorder prediction 245 265 - -
Psa2g1210 367 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1210 Psa-Chr2 92290252 92291699 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa2g1210 Ovate 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1210 - - cam:101489571 434.876