LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g1208	ATGGGAGGATCTCTACTTCGACTCTTCTTTCATGACTGCTTTGTTAATCTTGGAGGACCTTATTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAAACAGCGAGTTTCAACGATGCAAGCAATGGTGCTATTCCACCTCCCTTTTCTACTCTTGCCAACCTTATCAATAGGTTTAAAGCTCAAGGACTCTCTACTAAGGACATGGTAGCGTTATCTGGAGCTCACACTATTGGTAAGGCAAGATGTGTTGTTTATAGAGATCACATTTACAATGATACAGACATTGATAGTTTATTTGCCAAGTCAAGGCAAAGGAACTGTCCAAGGAAAAGTGGTTCAATAAAGGACAACAATGTAGCATTTCTTGATTACAAAACTCCAAACCATTTTGACAATGTCTACTACAATAATCTCATCAACAAAAAGGGACTCCTTCATTCTGATCAAGTGCTTTTCAATGGAGGTTCTACTGATTCATTGGTTAAAACTTATAGTAACAACCCAAAAGCCTTTGAATCTGATTTTGTTACTGCTATAATTAAGATGGGGAATATTAAGCCTCTTACCGGATCAAAAGGAGAGATTAGGAAGCAATGCAGAAGAGCCAATTGA	612	0.3791	MGGSLLRLFFHDCFVNLGGPYWKVKLGRRDSKTASFNDASNGAIPPPFSTLANLINRFKAQGLSTKDMVALSGAHTIGKARCVVYRDHIYNDTDIDSLFAKSRQRNCPRKSGSIKDNNVAFLDYKTPNHFDNVYYNNLINKKGLLHSDQVLFNGGSTDSLVKTYSNNPKAFESDFVTAIIKMGNIKPLTGSKGEIRKQCRRAN*	204

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g1208	203	ProSitePatterns	Peroxidases proximal heme-ligand signature.	67	77	IPR019793	-
	Psa2g1208	203	SUPERFAMILY	Heme-dependent peroxidases	1	203	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PRINTS	Haem peroxidase superfamily signature	2	16	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PRINTS	Haem peroxidase superfamily signature	63	80	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PRINTS	Haem peroxidase superfamily signature	123	138	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	ProSiteProfiles	Plant heme peroxidase family profile.	5	203	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	ProSitePatterns	Peroxidases active site signature.	2	13	IPR019794	GO:0004601
	Psa2g1208	203	PANTHER	PEROXIDASE	15	202	-	-
	Psa2g1208	203	PRINTS	Plant peroxidase signature	18	33	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PRINTS	Plant peroxidase signature	66	78	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PRINTS	Plant peroxidase signature	121	136	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PRINTS	Plant peroxidase signature	137	154	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PRINTS	Plant peroxidase signature	177	190	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	Pfam	Peroxidase	16	167	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	PANTHER	PEROXIDASE 72-RELATED	15	202	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa2g1208	203	Gene3D	Peroxidase, domain 2	45	182	-	-
	Psa2g1208	203	Gene3D	-	17	203	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g1208	Psa-Chr2	91968724	91971384	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa2g1208	5	203	Peroxidase	AT5G58390	61.809	1.41e-83	248

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g1208	K00430		-	gmx:100812478	295.049

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa2g1208	2	91968724	91971384	Psa2g1208	2	91968724	91971384	ECH
	Psa7g5269	7	459885195	459891990	Psa2g1208	2	91968724	91971384	ECH