Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1197 ATGGAGCTTTTAACCCAAAAACGTGTCAGTTCATTTCATATCATAAGAGAAGAAGTGTTCATGAACCTCATCAGAAGGATTATTGATTCACAGCAAGGATCAGCATCACCTATCAACATCACTCAACTTGTGGTTTCATCAACGTTTGCTATCATCACCAAGGCTGCACTTGGTGACAAATGCAAAGTACAAGAAGAGCTTGCGTCTTTAGGAAATGGAGAATCTGTTGCAGGAGGTTTTGACATAAGTGAACTGTTTCCTTCTGCTAAATGGCTTCAACTTGTTTCTGGTTTGAGGCTGAAACTTGAGAGATTGCATAGACAAGTTGATGAGTTACTAGAAAAGGTCATCATTGAACATAAGGAAGCAAAGTTGAAAGCATATCAAGGCCAAGGTGATGAAGTAGAAGCAGATCTTGTAAATGTTCTTCTAAATTTCCAGGGTGGTAATGATAGGGATGAAGATATATGCTTAACTGACAACAACATCAAAGCTATAATCATGGACATGTTAGGTGCTGGAGGTGATACATCAGCTTCTACCATAGTTTGGGCAATGTCAGAGTTGATAAGAGATGCAAGAGTGATGAAGAAAGCACAAGATGAAGTGAGAGAAATCTTCAAAATTGGTGAAAACAGTATTAATGAACTAGAATATTTGAAGTGTATTGTGAAAGAGACATTAAGATTACACCCTCCAGTTCCTCTTTTACTTCCAAGAGAATGTGGGCAAGCATGTGAGATAGATGGGTATGATATACCGATCAAAACCAAAGTGATAGTTAATGCATGGGCAATTGGAAGAGATCCAAAGTATTGGACTGAGCCAGAGAGGTTCTATCCAGAAAGATTCATTGGTAGTTCTATTGACTACAAAGGGGGTAGTTTTGAGTACATTCCTTTTGGTGCTGGGAGAAGAATGTGTCCGGGGATTACATTTGGTTTGATGAATGTTGAGCTAGCTCTTGCACTGTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGGTGAGGATTTGGATATGAGTGAGCAATTTGGAGCTACCATCAAAAGAAGAGATGATTTGTACTTGATTCCCATTCCCCATGTTCCTTCTGTGGTAAGATAA 1116 0.3898 MELLTQKRVSSFHIIREEVFMNLIRRIIDSQQGSASPINITQLVVSSTFAIITKAALGDKCKVQEELASLGNGESVAGGFDISELFPSAKWLQLVSGLRLKLERLHRQVDELLEKVIIEHKEAKLKAYQGQGDEVEADLVNVLLNFQGGNDRDEDICLTDNNIKAIIMDMLGAGGDTSASTIVWAMSELIRDARVMKKAQDEVREIFKIGENSINELEYLKCIVKETLRLHPPVPLLLPRECGQACEIDGYDIPIKTKVIVNAWAIGRDPKYWTEPERFYPERFIGSSIDYKGGSFEYIPFGAGRRMCPGITFGLMNVELALALLLYHFDWKLPNGMKGEDLDMSEQFGATIKRRDDLYLIPIPHVPSVVR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1197 371 Coils Coil 95 115 - -
Psa2g1197 371 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 301 310 IPR017972 GO:0005506|GO:0016705
Psa2g1197 371 Coils Coil 118 138 - -
Psa2g1197 371 Pfam Cytochrome P450 11 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 Gene3D Cytochrome P450 1 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS P450 superfamily signature 173 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS P450 superfamily signature 222 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS P450 superfamily signature 299 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS P450 superfamily signature 308 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PANTHER CYTOCHROME P450 71B11-RELATED 1 367 - -
Psa2g1197 371 SUPERFAMILY Cytochrome P450 3 364 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS E-class P450 group I signature 162 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS E-class P450 group I signature 182 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS E-class P450 group I signature 262 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS E-class P450 group I signature 298 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PRINTS E-class P450 group I signature 308 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1197 371 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1197 Psa-Chr2 90826122 90828434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1197 2 362 Cytochrome P450 AT3G26300 41.689 3.87e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1197 - - gmx:102665189 476.863