Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1194 ATGCATTGCTTCGGAGTTGCAGCCCAGGATGCAATTCACCAGCTTTCGTCTCAAATCAGTGTTCAGGTCGATGTAGACTTGGGAGATGGTTTGAAGGTATACAAGGTTGTTGACAGGGCGGAGTTTGAGGAGGTGAACAAAGAGGTGTTTGAAAAATGCGAAAGCCTTATCATCCAGTGTTTACATGATGCAAAGGTAGAAGCCGGGGATGTAAATGATGCTATAATTGTTGGTGGATGTTCTTATATCCCAAAAGTGAAGAATCTTGTTACTAACATATGCAAAGTATCAGAAATTTATAAAGATATAAATCCTTTCGAAGGTGCCGTTTGCGGTGCAGCAATGGAAGGAGCTGTCGCCTCAGGTATCACTGACCCATTTGGAAACTTGGATTTGTTAATGATTCAAGCCACACCTCTTGCCATTGGAATTCGAGCGGATGGAAACGAGTTTGTACCTGTAATTCCAAAGAACACCAGATTGCCAGCGCGTAAGGATCTAGTTTTCACAACTATTCGCGACAATCAGTCCGAGGCATTGATAGTTGTCTACGAAGGCGAAGGAAATCAGGCAGCAGAAGAAAATCATTTGTTGGGATATTTGAAGATAATCGGAATACCTGCAGCACCAAAAGGAGTTCCTGATATCAGTGTGTGCATGGACGTAGATACTGCAAACGTGCTGACAGTTTTAGCCGGTGTTGTGATGCCTGGATCTCGGGCACCTGCAGTTCCTTTTATGCAAGTGAGGATGCCGATGGTTGATGATGCGCAAGGTTGGTGTGCTGAGGCTATAAATAAAACCTATGGTGCTTCAATGGATTTGGTTACTCTCAAAAAGGCATGA 846 0.4374 MHCFGVAAQDAIHQLSSQISVQVDVDLGDGLKVYKVVDRAEFEEVNKEVFEKCESLIIQCLHDAKVEAGDVNDAIIVGGCSYIPKVKNLVTNICKVSEIYKDINPFEGAVCGAAMEGAVASGITDPFGNLDLLMIQATPLAIGIRADGNEFVPVIPKNTRLPARKDLVFTTIRDNQSEALIVVYEGEGNQAAEENHLLGYLKIIGIPAAPKGVPDISVCMDVDTANVLTVLAGVVMPGSRAPAVPFMQVRMPMVDDAQGWCAEAINKTYGASMDLVTLKKA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1194 281 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 4 280 - -
Psa2g1194 281 Gene3D - 53 100 - -
Psa2g1194 281 Gene3D Actin; Chain A, domain 4 7 52 - -
Psa2g1194 281 SUPERFAMILY Actin-like ATPase domain 6 119 IPR043129 -
Psa2g1194 281 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 132 238 IPR029047 -
Psa2g1194 281 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 128 244 IPR029047 -
Psa2g1194 281 PRINTS 70kDa heat shock protein signature 71 87 - -
Psa2g1194 281 PRINTS 70kDa heat shock protein signature 103 123 - -
Psa2g1194 281 PRINTS 70kDa heat shock protein signature 131 150 - -
Psa2g1194 281 PRINTS 70kDa heat shock protein signature 213 229 - -
Psa2g1194 281 Gene3D - 101 116 - -
Psa2g1194 281 PANTHER HEAT SHOCK PROTEIN 70KDA 4 280 IPR013126 GO:0005524|GO:0140662
Psa2g1194 281 Pfam Hsp70 protein 8 232 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1194 Psa-Chr2 90501320 90502165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1194 1 232 Calmodulin-binding Proteins AT3G12580 39.407 5.04e-51 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1194 K09489 - gmx:100809773 431.795