Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1192 ATGTTTTGTAAGAGAGAGAACATGGAGGAATTTAAGGAAGAGAAATGTTATGTGGAAACTGATCCAACTGGTCGTTATGGCAGGTTTGGAGATGTACTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAGTTACTTGGAATAGAGGTTGCATGGAACCAAGTGAGGCTCAATGAGGTACTTAATACGCCGGACGATTTGCAGCGGCTTTACTCGGAGGTTCATCTCCTGAGCACGCTCAAGCATCGGTCGATCATGCGATTCTACACGTCTTGGATTGATATCGATAACAAGGCTTTCAATTTCATTACAGAAATGTTCACATCAGGATCACTTAGAGAATACCGAAAGAAGTATAAGCGAGTGAGCGTACAAGCGATAAAGAGTTGGGCGCGCCAAATCTTGCATGGTCTAGTTTTTCTACATGAACATGATCCACCTGTTATCCATAGGGACTTGAAATGTGATAACATATTTGTGAATGGCCATCTTGGACAAGTGAAAATTGGTGATCTTGGACTAGCTGCAATTCTCCAAGGCTCTGAATCAGCTCATAGTGTTATAGGTACACCGGAGTTCATGGCACCGGAAATGTATGAGGAAGAATACAATGAACTTGCTGATGTTTACTCATTTGGCATGTGTGTATTGGAGATGCTCACATCTGATTATCCGTATAGCGAATGTACTAATCCAGCGCAGATTTACAAGAAAGTGACATCGGGGAAGCTGCCAATGTCGTTTTTCTGCATCGAAGACACGGAAGCACGGAGATTCATTGGAAAATGTTTAGAACCTGCAGCAAAGAGGCCGTCAGCGAAGGAGCTGTTGCTTGAGCCCTTTCTTTTGGCCGATGATTTGTCGTCGGCCAAGAAGTTGGCAATTCAGAAACCGTTTTTGAATGACAGTGAGATGGAGAAACTTCGACTGAGTGATGAATTTCCTAGGACTGAAATGAAAGTAATCGGAAAGTTGAATCCCGAAGACGAAACCATCTTTCTCAAAGTGCAAATTTCTGATAAGAATTGTTCTGTTAGGAATGTATATTTTCCATTTGATATTCACACTGACACACCAATTGATGTTGCAATGGAGATGGTAAAAGAATTGGAGATTTCTGATTGGGATCCTTACGATATTGCGAATATGATCAATAGAGAGATATCTGCTCTTCTGCCATATAGATGGAAAAATGAAAATTCAGATTCCTTCCAAACATTCAGTTACCAAAATGACGATATCGATGAACATCGTCTTCATTTCCGCTCAATCTCTTCTTGTTCATCGTTACAAGAATCAATACCGGATTCAGCCTGTAAAGCGGATGAAATATCGCGCGGTTATTATTTGCTTCATGATGATTTGCATGATGATAACAGTTCAAGATGCTCTTCACAAGGGACATATTCAAACTGGAACTACTATTCTATGGATGATCATGAACACAATGTAGCTTCGATCCGAAAAGATTATAACCTTCCCATCATAAAGAGTCACAAGGGCACAAGATTTTCACCTGGTGAAGAGTTTAGCAATTGCAACCAGTGTAAGATTTTAGGAGGATCACAGAACCCTTCACCTAGTAAAAACAAGATGATGATGGAAAATCGAAAACTGACACGGAACAGGTCACTGATCGATATGCGGAGCCAATTGTTACACAGATCATTGGTTGATGAATTGAACAAAAGAAGACAATTCAAGACTGTTGGTGCTGTGGAGAATATTGGATTTCAATCACCTTATGATGATTCTATATGA 1770 0.404 MFCKRENMEEFKEEKCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDELLGIEVAWNQVRLNEVLNTPDDLQRLYSEVHLLSTLKHRSIMRFYTSWIDIDNKAFNFITEMFTSGSLREYRKKYKRVSVQAIKSWARQILHGLVFLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSESAHSVIGTPEFMAPEMYEEEYNELADVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPMSFFCIEDTEARRFIGKCLEPAAKRPSAKELLLEPFLLADDLSSAKKLAIQKPFLNDSEMEKLRLSDEFPRTEMKVIGKLNPEDETIFLKVQISDKNCSVRNVYFPFDIHTDTPIDVAMEMVKELEISDWDPYDIANMINREISALLPYRWKNENSDSFQTFSYQNDDIDEHRLHFRSISSCSSLQESIPDSACKADEISRGYYLLHDDLHDDNSSRCSSQGTYSNWNYYSMDDHEHNVASIRKDYNLPIIKSHKGTRFSPGEEFSNCNQCKILGGSQNPSPSKNKMMMENRKLTRNRSLIDMRSQLLHRSLVDELNKRRQFKTVGAVENIGFQSPYDDSI* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1192 589 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1192 589 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1192 589 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Psa2g1192 589 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 6 588 - -
Psa2g1192 589 SUPERFAMILY Protein kinase-like (PK-like) 28 286 IPR011009 -
Psa2g1192 589 Gene3D - 324 403 - -
Psa2g1192 589 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1192 589 CDD STKc_WNK 25 285 - -
Psa2g1192 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Psa2g1192 589 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 588 - -
Psa2g1192 589 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1192 Psa-Chr2 90165591 90169309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1192 7 585 MAP Kinase Kinase Kinase AT5G58350 57.363 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa2g1192 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1192 K08867 - gmx:100272203 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1192 2 90165591 90169309 Psa2g1192 2 90165591 90169309 ECH