Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1186 ATGCAACATCCATCTTCAAACCCTAATTCTGGTTCAATTCCCAATCCTCACAATGCAAACACCGCATCCAAATTTCCACCACCGCCACCTCCATCAACGGCGGCGACAACCGCCGCCTGCAAGGCCTCCATGCTCCCACGCTCCGGCGGAAACGGTGGGTCCCTCCACCGGAGAGCTCACTCGGAGGTCAGTTTCCGGTTGCCTGACGACATGATGGACTTGTCTCCGTCGGATCCGTTCACCGGCGGATCGTCGACGGCGAGCTTAGATGAGATCGGATCCGAGGATGACCTGTTCTCGACGTACATTGACATGGATAAGCTCGGAGGTTCTAACGATATGGGAGACGCCGGAGCAGATCCGGGAAGGAATGATGAGGCGGAGAAGAACCAAGGGAGGTCGAGGCATAGGCATAGTAGTTCGGTGGATGGTTCTTCGTCGTTTGGGGAGATTATGGATGGGAAGAAAGCTATGCCTCCTGATAAGCTAGCTGAGCTATGGTCTATTGATCCCAAGCGTGCAAAAAGAATACTTGCGAATCGACAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCCCGCTATATTCATGAACTAGAGCGCAAAGTTCAGACCCTACAGACTGAAGCTACCACTCTTTCTGCCCAACTGACATTATACCAGAGAGACACTACTGGTCTGAGTAATGAGAATACTGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAGGCACATCTCCGTGATGCTCTTAATGATGCATTGAAGAAAGAAGTTGAGAGACTGAAGGTTGCTACCGGAGATATAAGGAGCCACACTGAATCTTTCAATCTTGGTATGCACCAGATGCCATTTACAGAATCAAATTACCTTCCCATTTCACCACAATCAGGTCATCCTGGTCACCGTAACATCCAGTTGCCACTATTTGGTCACTCCCCATCTAGCATGGCAACTCATCAACTGCAACAAACAAATTCTCATTCATTTTCAGAATTACTGCAAAGTGATCAGATTGGTCGTTTTCAAGGACTTGATATTAGCAGCAAAGGAACAACCATTGTTAAGTCTGAAGATCCTTCTCTTTCTGCAAGTGAGAGTAGCACTACATTTTGA 1113 0.4843 MQHPSSNPNSGSIPNPHNANTASKFPPPPPPSTAATTAACKASMLPRSGGNGGSLHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFSTYIDMDKLGGSNDMGDAGADPGRNDEAEKNQGRSRHRHSSSVDGSSSFGEIMDGKKAMPPDKLAELWSIDPKRAKRILANRQSAARSKERKARYIHELERKVQTLQTEATTLSAQLTLYQRDTTGLSNENTELKLRLQAMEQQAHLRDALNDALKKEVERLKVATGDIRSHTESFNLGMHQMPFTESNYLPISPQSGHPGHRNIQLPLFGHSPSSMATHQLQQTNSHSFSELLQSDQIGRFQGLDISSKGTTIVKSEDPSLSASESSTTF* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1186 370 SUPERFAMILY Leucine zipper domain 172 223 IPR046347 GO:0003700|GO:0006355
Psa2g1186 370 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Psa2g1186 370 MobiDBLite consensus disorder prediction 1 20 - -
Psa2g1186 370 CDD bZIP_plant_RF2 173 222 IPR044759 GO:0003700|GO:0006355
Psa2g1186 370 Coils Coil 223 243 - -
Psa2g1186 370 Gene3D - 171 224 - -
Psa2g1186 370 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700|GO:0006355
Psa2g1186 370 MobiDBLite consensus disorder prediction 119 140 - -
Psa2g1186 370 PANTHER ATBZIP TRANSCRIPTION FACTOR 7 367 - -
Psa2g1186 370 Coils Coil 188 215 - -
Psa2g1186 370 Pfam bZIP transcription factor 172 226 IPR004827 GO:0003700|GO:0006355
Psa2g1186 370 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 367 - -
Psa2g1186 370 MobiDBLite consensus disorder prediction 119 156 - -
Psa2g1186 370 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1186 Psa-Chr2 89934985 89938207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1186 12 370 bZIP Transcription Factor Family AT2G40620 50.251 1.78e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa2g1186 bZIP_1 7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1186 - - vra:106763153 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1186 2 89934985 89938207 Psa2g1186 2 89934985 89938207 ECH
Psa5g3449 5 268798194 268802190 Psa2g1186 2 89934985 89938207 PCT