Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1181 ATGGCAAAGGGATCCTCTAGTAACAACTATGAAGAAGCTAGAAAGTTAAGACTTGAAGAGAACAAGAAGAGGTTTGAGGATTTAGGAATTTCAACAATATCGAAAACATTAATCGAAATTGCAAGTCCAGCAAAGAAGTCCGCGAATCGTCTTTACAGACCAAAATCAAAGACTATTGTTGTTGTGGAACCAAGGCGTTCTTCTCGTGCAAGAAACCCAGTTCCTTCGTATCGTGAAGAGTTTGGCACAGACCTTCCTAATCTCCGGAAGAGGTCGAGGTCAATTCCGTCATCATGGGGAAGTTACATTGCAAGGCCACTAGACGAAATCAAAGAAGCTACAAGTCAAGAAAGAAATCATGCTTTGGAGGCTGCAGAGGCACTCCAAATCAATTTGAACTCTTCGAAACCATCTTTTATCAAGTCTATGGTCCGGTCCCATGTTTATAGCTGTTTTTGGTTGGGTCTTCCTAGTAGATTTAGTGAGGAACATCTTCCAAAAACAGTGTATAACATGGTTTTAGAGGATGAAGAAGGATCAGAATACAAGGCTGTTTACATTGGCACTAGAGCTGGGCTTAGTGGTGGCTGGAGAGCATTTGCACTGGAACATAAGTTGGATGATGGTGATGCACTAGTTTTTGAATTGGTTGAACCAGCAAGATTTAAGGTTTATATTGTTAGAGCATTTCCAGATGCATATGAAGAAGAAAAGATAGAAGAAGAAAACAACACTTTGATAGAAGAAGAAAATATGCACACATTGAAAGCAACAAAAGAATCTAAGGCTGCCAATAATCGCAAATCAGAACCAAAGAGTAAAAAGCAAAAACGTGCCATTGTATGTGAAACTAAGGAATCAAAGAGTTCTGAAGAAAGTCTGTTCGAAAGTAGCATTGAAAAAGATGTTAAACCACAGAGGGCAAATACGAGTAGAAAAACTAAATCATCTCAGAAAAAACTGCCAAAGAAGTCTGAACTACCTACCACTCCTGATTCTGAAGCAAAAATTGAAACGCCAAAACCAAATGCAACTACCGGAAGAAACACTAGATCTTCTCAGAAAATAGTGCAAAAGATATCCGAAGCATCTACTACTCTTGAACCGAAAGAGGAAGCACAAGTTGAAACTACGAAGAAAGAACTTGTTCAGCATGATGATATTAAGTTAAAGAAAGTTAAGCCAGTTGGAAAACCTCGAAAAAACTCAGCTCCTAAAAACCCAATGAACTTTTCAAAGAGTTGTGAATGTGAAATTGTTCTATGCTTTCTGTTTTGCTGCTGTTTTTTATTGGCTGCTACTCAAAGAACTGACCCTATTGAAGTTGATACATTGAGAATCATAAAGGAGAATTTGATTGATATTAATGGAAATTTGAGCAACTGGAATGATGGAGATCCATGTACATCCAAGTGGACAGGAGTTATGTGCTCCAATACAACATTAGATGATGATTTTCTACATGTTCAAAGATTGCATCTAATGAATATGAGTTTAGCTGGAACTTTGGTACCAGAGATTGGCAAGTTATCTCATCTGAAAATATTGGACTTTATGTGGAACAACATAACCGGGAACATTCCGAAGGAAATCGGCAATATCAAAACTTTAAGACTCTTGCTTTTGAATGGAAATCAATTAACAGGTCATTTACCCGAAGAGCTTGGTTATCTTCCAGTCCTGAACAGAATCCAAGTTGATCAAAACAATCTTACAGGACCAATACCTTTATCATTCGCAAACTTGACAAATGCACAACACTTTCACATGAACAACAATTCACTCAGTGGACCAATTCCACCACAGCTTTCTGGCTTAAGAAACCTTCTTCACCTACTTCTTGACACCAACAATTTATCAGGAAATCTCCCAGATGAGCTTGCTGAGATGCCAAGCCTAAAGATACTTCAACTCGATAACAACAACTTTGGTGGAAATAGCATTCCAAGTTCTTATGGAAACATGCTAAAATTATTGAAATTGAGCCTTAGGAACTGCAATTTGACGGGACCAATTCCTGATTTAAGCAAGATACCACGCCTTGGTTATATTGACCTCAGTTTCAATCATTTGAATGAATCAATTCCTACTAATAAGCTATCTGATAATATCACAACCATTGATTTATCAAACAATAATCTTGATGGTACTATTCCATCTTACTTTTCTGATCTTCCACATCTTCAGAAATTGTCTTTTGCAAACAATGCACTAAGTGGCAATGTTCCCTCTTCCATTTGGCAGAACAAGACTTCAAATGGATCAGAAAAGCTTCTATTGAACATGCAAAATAATCAACTCACAGGCATATCAGGAAGTACAACAAATCTTCCTCCAAATGTCACACTCATGCTTGAGGGGAATCCTATATGCTCAAATAACAACAACAGCACCATAGTTAAGTTCTGTGGATCTGAAACTGAAAATGATATGAATGGCAACTCCAATATTACCTGTCCAAGTCAACCATGCCCTCCTCCTTACGAATACTCTCCGGAGTGTGTCTGTGCAGTGCCGTTGCTCGTGTATTATCGATTGAAAAGTCCAGGATTTTCAGATTTTAATACATATGTGGAAGAATTCGAAAGCTTCTTGGCAAGTGGCCTTGACATACAGAATAATCAGCTATTCATTAATAGTTTTATGTGGGAAGAAGGTCGATTGCGAATGCACTTGAAGCTTTTTCCTGTGTATGTTGATAATGCAAACTCTTATACTTTCAATGACAGTGAGGTTATTAGGATAAGAGACTTGTTTAGAGAATGGAATATTCATGAGAATGACTTGTTTGGTCCTTATGAACTTCTTGAATTCATTCTCCTCGATCCTTACAAAGACGGGCTTGTCGACTCTTCAAGTTCGGGAATAAGCACAGGTGCGGTGGTTGGAATCGTGTTAGGAGCAATTGCCATTTCAGTTACATTATCTGCAACTGTTGCCATATTTATACTAAAAATACGGTTGAAAGATTACCGTACACTCTCCAAAGGGCGTAAAGGCTCTAAGATCTCGATAAAAATTGATGGTGTAAGATCATTCAATTTCGAAGAAATGGCTTTGGCTACAAGCAATTTTAGTGAATCTGCTCAAATTGGACAAGGAGGGTATGGGAAGGTTTATAAAGGTAATCTTCATGACGGAACTGTTGTTGCCATAAAACGCGCGCAAGAAGGTTCGCTGCAAGGTGAGAGGGAGTTTCTTACAGAGATAGAATTGCTATCGAGGTTACATCATCGTAACCTTGTGTCTCTGATTGGATATTGCGACGAAGATGGTGAACAGATGCTGGTTTATGAATATATGCCAAATGGAACACTAAGGGATCACCTTGCTGCTTATTCTAAAGAACCTCTTAGTTTTGCAATGAGATTGAAGATAGCTCTAGGGTCAGCTAAAGGTCTTGTGTACCTACACACAGAAGCTGATCCTCCAATATTCCACAGAGATGTCAAAGCTAGCAACATATTATTAGACTCAAAGTACATAGCAAAAGTTGCTGATTTTGGACTTTCAAGACTAGCACCAGTTCCAGATATTGAAGGCAATTTGCCTGCTCATGTATCTACCGTTGTAAAAGGGACCCCGGGTTACCTCGATCCAGAGTATTTCTTAACGCGCAAGTTAACTGACAAAAGTGATGTTTATAGTCTCGGTGTTGTATTTCTTGAAATCGTGACTGGAAAACCACCAATCTTTCACGGCGAAAATATTATTAGACAGGTTAAACTGGCGTTCGAATCGGGTGGAATATTTTCGATTGTTGATAACAGAATGGGATTCTACACTAGTGAGTGTGTGGAAAAGTTATTAATTTTGGGTTTAAATTGTTGCAAAGATGCGCCGGAAGAAAGGCCGAAAATGGAAGAAGTGGCTAGAGAACTCGAAATCATATTGTCGATGATGCCGGATTATCATGCCAAAAAAGGTGGTGAATATGATACAAGTGATTCTGGAAGTACATTCAGTTCACAACCTTCATCATCTGTTATGAAGAATTCTTTTGTTTCAGAAGATAGTTTGGGGAGTGAGCTTGTTAGTGGAGATATACCTACCATTAGACCAAGGTAG 4068 0.385 MAKGSSSNNYEEARKLRLEENKKRFEDLGISTISKTLIEIASPAKKSANRLYRPKSKTIVVVEPRRSSRARNPVPSYREEFGTDLPNLRKRSRSIPSSWGSYIARPLDEIKEATSQERNHALEAAEALQINLNSSKPSFIKSMVRSHVYSCFWLGLPSRFSEEHLPKTVYNMVLEDEEGSEYKAVYIGTRAGLSGGWRAFALEHKLDDGDALVFELVEPARFKVYIVRAFPDAYEEEKIEEENNTLIEEENMHTLKATKESKAANNRKSEPKSKKQKRAIVCETKESKSSEESLFESSIEKDVKPQRANTSRKTKSSQKKLPKKSELPTTPDSEAKIETPKPNATTGRNTRSSQKIVQKISEASTTLEPKEEAQVETTKKELVQHDDIKLKKVKPVGKPRKNSAPKNPMNFSKSCECEIVLCFLFCCCFLLAATQRTDPIEVDTLRIIKENLIDINGNLSNWNDGDPCTSKWTGVMCSNTTLDDDFLHVQRLHLMNMSLAGTLVPEIGKLSHLKILDFMWNNITGNIPKEIGNIKTLRLLLLNGNQLTGHLPEELGYLPVLNRIQVDQNNLTGPIPLSFANLTNAQHFHMNNNSLSGPIPPQLSGLRNLLHLLLDTNNLSGNLPDELAEMPSLKILQLDNNNFGGNSIPSSYGNMLKLLKLSLRNCNLTGPIPDLSKIPRLGYIDLSFNHLNESIPTNKLSDNITTIDLSNNNLDGTIPSYFSDLPHLQKLSFANNALSGNVPSSIWQNKTSNGSEKLLLNMQNNQLTGISGSTTNLPPNVTLMLEGNPICSNNNNSTIVKFCGSETENDMNGNSNITCPSQPCPPPYEYSPECVCAVPLLVYYRLKSPGFSDFNTYVEEFESFLASGLDIQNNQLFINSFMWEEGRLRMHLKLFPVYVDNANSYTFNDSEVIRIRDLFREWNIHENDLFGPYELLEFILLDPYKDGLVDSSSSGISTGAVVGIVLGAIAISVTLSATVAIFILKIRLKDYRTLSKGRKGSKISIKIDGVRSFNFEEMALATSNFSESAQIGQGGYGKVYKGNLHDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEDGEQMLVYEYMPNGTLRDHLAAYSKEPLSFAMRLKIALGSAKGLVYLHTEADPPIFHRDVKASNILLDSKYIAKVADFGLSRLAPVPDIEGNLPAHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEIVTGKPPIFHGENIIRQVKLAFESGGIFSIVDNRMGFYTSECVEKLLILGLNCCKDAPEERPKMEEVARELEIILSMMPDYHAKKGGEYDTSDSGSTFSSQPSSSVMKNSFVSEDSLGSELVSGDIPTIRPR* 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1181 1355 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 421 1326 - -
Psa2g1181 1355 MobiDBLite consensus disorder prediction 339 371 - -
Psa2g1181 1355 ProSiteProfiles Protein kinase domain profile. 1025 1298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1181 1355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1145 1157 IPR008271 GO:0004672|GO:0006468
Psa2g1181 1355 SMART serkin_6 1025 1297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1181 1355 SMART B3_2 139 230 IPR003340 GO:0003677
Psa2g1181 1355 CDD STKc_IRAK 1031 1297 - -
Psa2g1181 1355 Gene3D Transferase(Phosphotransferase) domain 1 1101 1313 - -
Psa2g1181 1355 Pfam Leucine rich repeat N-terminal domain 441 478 IPR013210 -
Psa2g1181 1355 MobiDBLite consensus disorder prediction 1313 1328 - -
Psa2g1181 1355 SUPERFAMILY L domain-like 452 818 - -
Psa2g1181 1355 ProSitePatterns Protein kinases ATP-binding region signature. 1031 1053 IPR017441 GO:0005524
Psa2g1181 1355 Gene3D Ribonuclease Inhibitor 701 808 IPR032675 -
Psa2g1181 1355 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 421 1326 - -
Psa2g1181 1355 Gene3D - 113 230 IPR015300 -
Psa2g1181 1355 SUPERFAMILY DNA-binding pseudobarrel domain 134 228 IPR015300 -
Psa2g1181 1355 MobiDBLite consensus disorder prediction 245 309 - -
Psa2g1181 1355 Gene3D Ribonuclease Inhibitor 594 700 IPR032675 -
Psa2g1181 1355 ProSiteProfiles B3 DNA-binding domain profile. 139 230 IPR003340 GO:0003677
Psa2g1181 1355 Pfam B3 DNA binding domain 139 228 IPR003340 GO:0003677
Psa2g1181 1355 MobiDBLite consensus disorder prediction 241 381 - -
Psa2g1181 1355 MobiDBLite consensus disorder prediction 1308 1328 - -
Psa2g1181 1355 Gene3D Phosphorylase Kinase; domain 1 996 1100 - -
Psa2g1181 1355 CDD B3_DNA 137 228 IPR003340 GO:0003677
Psa2g1181 1355 Pfam Protein tyrosine and serine/threonine kinase 1028 1294 IPR001245 GO:0004672|GO:0006468
Psa2g1181 1355 Gene3D Ribonuclease Inhibitor 440 593 IPR032675 -
Psa2g1181 1355 SUPERFAMILY Protein kinase-like (PK-like) 1011 1307 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1181 Psa-Chr2 89738984 89751149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1181 419 1307 Receptor kinase-like Gene Family AT5G01950 56.493 0.0 968
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Psa2g1181 PK_Tyr_Ser-Thr 1.2e-45 CL0016
TF B3 Psa2g1181 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1181 - - gmx:100801035 1324.69