Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1178 ATGACAAGCAAGACACACCAAAACCACAAACTCAACCTAACCCACCTAACCAACCAAAAGCTCTCTATAAAAACCCAACAACCACTACCAACATTTCCATTACACCACAACACAAAAATGGATCTCCTTCTTCTCGAAAAGACCCTTTTAGCCCTCTTCCTCGCCGCCATAACCGCCATCACAATCTCAAAACTCCGCGGCAAACGCTTCAAACTCCCTCCTGGCCCCTTCCCCGTCCCCGTCTTCGGCAACTGGCTCCAAGTCGGCGATGATCTCAACCACCGCAACCTCACCGATTTAGCCAAACGCTTCGGCGAAATCCTCCTCCTCCGCATGGGACAACGCAACCTCGTCGTCATCTCCTCCCCGGAACTCGCCAAAGAAGTTCTCCATACCCAAGGAGTCGAGTTCGGCTCCCGAACACGAAACGTCGTCTTCGACATCTTCACCGGAAAAGGCCAGGACATGGTTTTCACTGTCTACGGCGAACACTGGCGGAAAATGCGAAGAATCATGACCGTCCCGTTCTTCACCAACAAAGTTGTTCAACAGTACCGATTCGGTTGGGAATCGGAAGCCGCTAGTGTTGTTGATGATGTGAAGAAAAATTCCAAAGCTAGTGTGAATGGAATTGTGATTCGGAGAAGATTGCAATTGATGATGTATAATATCATGTATAGGATTATGTTTGATAGAAGATTTGAGAGCGAGGAAGATCCTTTGTTTGTGAAGTTGAAAGCTTTGAACGGTGAAAGGAGTCGTTTGGCGCAAAGCTTTGAGTATAACTATGGCGATTTTATTCCAATTTTGAGACCTTTTTTGAAGGGTTATTTGAAGGTTTGTAAAGAGGTTAAAGATAGAAGGTTGCAGCTTTTCAAAGACTACTTTGTTGATGAAAGAAAGAAGCTTGGAAGTACTAAGAGCACAGATAATGAAGGATTAAAATGTGCTATTGATCATATTTTGGATGCTCAAAAGAAGGGTGAGATCAATGATGACAATGTGCTTTATATTGTTGAGAACATCAATGTTGCTGCAATTGAGACAACATTATGGTCAATTGAATGGGGAATTGCTGAGCTAGTGAACCATCAAGAGATTCAAAACAAGTTAAGGGAAGAGATGGACAAAGTTCTTGGACCAGGACACCAAGTAACCGAACCAGATCTCGAGAAGCTACCTTACCTACAAGCCGTGATCAAAGAGACCCTCCGTCTTCGAATGGCGATTCCACTTCTCGTACCACACATGAACCTTCATGATGCCAAGCTCGGTGGTTTTGACATCCCGGCTGAAAGCAAGATACTGGTCAATGCGTGGTGGCTTGCAAACAACCCGGCTCTATGGAAAAAGCCGGAGGAGTTTAGGCCCGAGAGGTTCTTGGAGGAAGAGGCTCATGTTGAGGCGAACGGGAATGATTTTAGGTACCTTCCGTTCGGTGTTGGTAGAAGGAGTTGCCCTGGGATTATTCTCGCTTTACCGATCCTTGGTATTACTATCGGTCGTCTGGTCCAGAATTTCGAGCTATTGCCTCCACCGGGACAATCTAAGATCGACACTTCTGAGAAAGGAGGACAATTTAGTCTGCACATACTCAAACATTCCACCATTGTTGCTAAGCCAAGAGCATTTTAA 1635 0.4538 MTSKTHQNHKLNLTHLTNQKLSIKTQQPLPTFPLHHNTKMDLLLLEKTLLALFLAAITAITISKLRGKRFKLPPGPFPVPVFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTDNEGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRAF* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1178 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Psa2g1178 544 Gene3D Cytochrome P450 59 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 40 544 - -
Psa2g1178 544 Pfam Cytochrome P450 73 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 SUPERFAMILY Cytochrome P450 73 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 125 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g1178 544 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 40 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1178 Psa-Chr2 89461374 89465725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1178 40 542 Monolignol Biosynthesis Gene Families AT2G30490 84.493 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1178 K00487 - pop:7498118 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1178 2 89461374 89465725 Psa2g1178 2 89461374 89465725 ECH