Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1176 ATGGCAGAGGTTACTATAAGAAAACTCTCGATGAAGTTCTACTCATCTCCATTGGAAGTTTTCCTTTTTATCATTGTAATTCTTTCTCCTCTAGTCATCGCTGACCTGAATTCTGATAAGCAAGCACTTCTTGATTTTGTTACTTCTGTCCCTCATCGTCGGAACCTTAAATGGGACCTAGCTACCTCAATATGTACATCTTGGATAGGTATCACTTGCAATCCAAATCTTACTCATGTTGTTTCTGTCCGGCTCCCTGGAGTCGGACTAGTAGGCACCATTCCAGCCAATACACTCGGCAAAATTGACTCGCTGAAAACTATTAGCCTTCGCTCGAACCTACTTAGTGGAAATCTACCTCGGGATATTACTTCTCTTCCGTCCCTACAATATCTCTACCTTCAGCATAATAACCTTTCTGGTGAATTACCAACCTCGTTATCATCGCAACTCAGTGCACTTGTTTTGTCATACAATTCATTCACAGGTAACATTCCAAAGACATTGCAAAACTTAACACAACTAACTCATTTGAGCCTTGAGAACAATTCGTTATCTGGACCGATACCTGATCTCCATGTCAATCTCAAACAGTTGAATTTAAGTTACAACCATTTGAATGGCTCTATCCCTTCGTCTCTACATAGTTTCTCAAGTTCGTCGTTTGAAGGGAACTCTCTTTTATGTGGATTACCTCTAAAGTCGTGTTCGTTAGTCCCTCCTTCATCGGCACCTCCTCCTGCACTGGTTCCTGTAAGACATAACTCCAAAAGTAAACTTAGTAAAGGAGCTATCATTGCAATTTCTGTTGGTGGAGCTGTTCTGTTATTTTTCTTAGTTCTTGTAATTGTTCTTTGTTGTTTAAAGAAGAAAGATAATGGAAGCTCGAGAGTTGTTAAAGCAAAGGGGCCTAGTGGTGGTGGTGGAAGAACTGAAAAACCAAAAGAAGAGTTTGGAAGTGGCGTGCAAGAATCTGAGAAAAACAAATTGGTTTTCTTTGAGGGATGCTCTTATAATTTCGATCTCGAGGATTTGTTGCGAGCTTCGGCCGAGGTTCTCGGAAAGGGTAGTTATGGAACTGCATATAAGGCCATCTTGGAGGAATCAACAACAGTTGTAGTGAAAAGGCTGAAGGAAGTTGTGGTCGGAAAGAGGGAATTTGAACAGCAGATGGAGATTGTTGGAAGCATTGGAAATCACCCGAATGTTGTTCCACTTCGCGCTTATTATTATTCGAAGGATGAGAAGCTTTTGGTTTGTGACTATTTCCCAAATGGCAATCTATCTATACTCTTGCATGGTACTAGGACAGGCGGAAGAGTTACCTTAGATTGGAACATGCGAGTAAAAATCACTCTCGGAATTGCTCGGGGAATCGCGCATTTACATTCAGTTGGCGGTCCAAAATTCACACACGGGAATGTAAAATCCTCCAATGTCCTCGTAAACCAAGATAACGATGGCTGCATTTCTGATTTCGGCCTGACACCAATCATGAACGTTCCTGCGACCCCTTCTAGAACCGCAGGCTACCGTGCTCCCGAGGTAATCGAAACTCGAAAGCACACTCATAAATCAGACGTGTACAGTTTCGGTGTCCTCCTTTTAGAAATGCTTACAGGTAAAGCGCCACAACAGTCTCCAATACGCGATGACATGGTTGATCTGCCTAGGTGGGTTCAGTCTGTTGTTAGGGAGGAATGGACCGCCGAGGTTTTCGATGTGGAGCTAATGAGGTACCAAAATATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCTTGCGTTGCCAAGGTTCCGGATCTGAGGCCTAACATGGAGGAAGTAGTGAGGATGATTGAAGAAATTCGACAATCTGACTCCGACAACCGACCGTCTTCTGACGAGAATAAATCCAAGGATTTAAATGTTCAAACACCATGA 1929 0.4266 MAEVTIRKLSMKFYSSPLEVFLFIIVILSPLVIADLNSDKQALLDFVTSVPHRRNLKWDLATSICTSWIGITCNPNLTHVVSVRLPGVGLVGTIPANTLGKIDSLKTISLRSNLLSGNLPRDITSLPSLQYLYLQHNNLSGELPTSLSSQLSALVLSYNSFTGNIPKTLQNLTQLTHLSLENNSLSGPIPDLHVNLKQLNLSYNHLNGSIPSSLHSFSSSSFEGNSLLCGLPLKSCSLVPPSSAPPPALVPVRHNSKSKLSKGAIIAISVGGAVLLFFLVLVIVLCCLKKKDNGSSRVVKAKGPSGGGGRTEKPKEEFGSGVQESEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGSIGNHPNVVPLRAYYYSKDEKLLVCDYFPNGNLSILLHGTRTGGRVTLDWNMRVKITLGIARGIAHLHSVGGPKFTHGNVKSSNVLVNQDNDGCISDFGLTPIMNVPATPSRTAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPIRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDLRPNMEEVVRMIEEIRQSDSDNRPSSDENKSKDLNVQTP* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1176 642 Gene3D Phosphorylase Kinase; domain 1 315 422 - -
Psa2g1176 642 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Psa2g1176 642 MobiDBLite consensus disorder prediction 298 322 - -
Psa2g1176 642 ProSiteProfiles Protein kinase domain profile. 347 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1176 642 PANTHER LRR RECEPTOR-LIKE KINASE 8 642 - -
Psa2g1176 642 PANTHER OS05G0588300 PROTEIN 8 642 - -
Psa2g1176 642 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Psa2g1176 642 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1176 642 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Psa2g1176 642 CDD STKc_IRAK 353 618 - -
Psa2g1176 642 ProSiteProfiles Leucine-rich repeat profile. 195 217 IPR001611 GO:0005515
Psa2g1176 642 SUPERFAMILY L domain-like 48 235 - -
Psa2g1176 642 Pfam Leucine rich repeat 93 139 IPR001611 GO:0005515
Psa2g1176 642 MobiDBLite consensus disorder prediction 618 633 - -
Psa2g1176 642 Gene3D Transferase(Phosphotransferase) domain 1 423 641 - -
Psa2g1176 642 MobiDBLite consensus disorder prediction 618 642 - -
Psa2g1176 642 SUPERFAMILY Protein kinase-like (PK-like) 351 625 IPR011009 -
Psa2g1176 642 Gene3D Ribonuclease Inhibitor 150 193 IPR032675 -
Psa2g1176 642 Gene3D Ribonuclease Inhibitor 37 149 IPR032675 -
Psa2g1176 642 Gene3D Ribonuclease Inhibitor 196 237 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1176 Psa-Chr2 89270325 89274149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1176 10 640 Receptor kinase-like Gene Family AT5G58300 68.175 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa2g1176 Pkinase 8.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1176 - - gmx:100818344 973