Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1172 CACATAGCATTATCTGATCACGTGAAATTCACAATTGAGTCCTTTATCAACCTTGATGTTGTGAACTATATTCAGCTTCTCGGTCCTGAATATGAACTCTTGAAGAAGAAGTATCTGGATGAATCTTCTGAGCGAAAACGACTTCACAAGTGCAATATGATTGTCTTCATGACGTTTCGTATCCACATGGCTACGTTCACGCTTCATTTTCTACTACCTGCTGATTCATCTACTGCTGAAGGTCCATACAAGGTGCTTCGTTTACTAAATGAACAAACTGGAGAAAAGCGAGCTATAAACTTGTGGGATGAATGGTCTTACAGTGTAATTGCACCTAGAGATGCCGTGAACATAATTGGTCAATTTGATGAAGGGGGAAATTGTGATATTAATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTTGTGTCTGGAACACGGATTGTTGCTAGTTTTAGTTTCCCAAAGAAGAACCGTCTTAGACGAGAGGCTAAAAAGCAAGTCAACCACCTAGTTGAAAGTACTAAGTCACATATACATAAAGTGGTTGTTGGTGATTTCTCCGATTCTAATTATTTGGTTTTGGAGGCATCTGAAAAATCGCAACCTGCTGATTCATCTGCTACTGTCCCTAATGCCAAGGAATTTGCTGATTGGGTGGCAAAGGTGCACCAACACCCTGGTCATATTGTTTATGCAGATTACCAATCAAACTAA 723 0.39 HIALSDHVKFTIESFINLDVVNYIQLLGPEYELLKKKYLDESSERKRLHKCNMIVFMTFRIHMATFTLHFLLPADSSTAEGPYKVLRLLNEQTGEKRAINLWDEWSYSVIAPRDAVNIIGQFDEGGNCDINHDNNFLIVHPDILVSGTRIVASFSFPKKNRLRREAKKQVNHLVESTKSHIHKVVVGDFSDSNYLVLEASEKSQPADSSATVPNAKEFADWVAKVHQHPGHIVYADYQSN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1172 240 Pfam DNA replication factor Dna2 91 166 IPR014808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1172 Psa-Chr2 88904890 88905967 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1172 74 162 Core DNA Replication Machinery Family AT1G08840 56.180 1.96e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1172 K10742 - pop:7463392 135.191