Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1151 ATGGCAGATGAGACACCAAATGATTTGAAGGAGGAGGTTTCAGATATAGCACCATTTGACCCTACTAAGAAGAAAAAGAAGAAGAAAGTTACTGTTATAGATCCTACAGCTGATGAATCGGTGGATAAATTGGCTCAGAAGACCGAAAATCTGTCAGTTGCTGATGAGGCAGAGTCTTCATTTTCTGGTTTGAAAAAGAAAAAGAAGAAGCCTGTTGAAATCAGCAACTTAAACGAGGAGAGTGGAGAAACAGCTGAAGATTTGGAAGATCTTCCTGAAGAAGATGAAGAAGAAGCGATTTCTTTGCAGCCTCGTTATGCTTGGGAAGGGAGTGACCGTGACTATGAATATGAGGAGCTTCTTGGTAGGGTGTTTAACATTCTACGTGAAAACAATCCAGAACTTGCTGGAGATCGTCGAAGGACAGTTATGAGGCCTCCTCAGGTTCTTCGTGAAGGCACAAAGAAAACTGTGTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGACAGCCAGACCATGTTATGGCTTTCTTGCTTGCTGAACTGGGTACTAGTGGCTCCCTAGACGGACAGCAAAGGTTGGTTGTTAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTCTGCGACGATATATTAATGAATATGTTATTTGTCTTGGATGCAAGAGTCCAGACACAATACTTTCAAAGGAAAACCGTCTCTTCTTTCTTCGGTGCGAGAAGTGTGGATCTGGAAGATCAGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGACCGCAGGGTCATGA 810 0.4259 MADETPNDLKEEVSDIAPFDPTKKKKKKKVTVIDPTADESVDKLAQKTENLSVADEAESSFSGLKKKKKKPVEISNLNEESGETAEDLEDLPEEDEEEAISLQPRYAWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRTAGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1151 269 MobiDBLite consensus disorder prediction 60 76 - -
Psa2g1151 269 MobiDBLite consensus disorder prediction 52 100 - -
Psa2g1151 269 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Psa2g1151 269 MobiDBLite consensus disorder prediction 80 97 - -
Psa2g1151 269 MobiDBLite consensus disorder prediction 1 31 - -
Psa2g1151 269 Gene3D - 112 254 - -
Psa2g1151 269 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
Psa2g1151 269 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Psa2g1151 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 268 IPR045196 GO:0003743|GO:0006413
Psa2g1151 269 MobiDBLite consensus disorder prediction 1 22 - -
Psa2g1151 269 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Psa2g1151 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1151 Psa-Chr2 87872816 87877140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1151 1 265 Eukaryotic Initiation Factors Gene Family AT5G20920 76.030 8.21e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1151 K03238 - gmx:100783618 452.981