Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1131 ATGTTACAAGTTGGTCCTGCTGGAAACAAATGCCTAGCCTCATCAAACCACAACCCTGCAGTGAGTATACACCAACACCCCACAATTTTTGTTGGTATTTTGGACAAAGACTTGAGTCATAGGACACTTTTGCAGTATCTGAAACTGTATAGTACTGGTTACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGCTTGACACAGTATGGCAGAGCCTTGTTCTCTTTTACACACCGTTGTTTACCTATAAGGATAGTTCGATCGATATATGGAGCATGGGGAGCTTGTGGGCAATTGCAGTTGTTATCCTTGTAAATGTGCACCTGGCGGATCATCATGGGCAAGCTACTCTGATGAAGTCAGTATTGAAACCTGGGTATAATTTTGATCAACTACTGGTTCTAGATTTTAAGGGGAACAATTTGATTCTGTCTGCCAAAAGTTCGCTTATCAAATACGCTCAGCAGATTCCTGCAGATATTAGTCAGATGCATCCTAACTCGGTTGTACATGGTTATATAGGTAACATAATTGAGACTGGATGCTTCGTTCGTTTCCTTGGTCAATTAACTGGCTTTTCTCCAAGAAATAAGGCTGCAGATGACCAGAAAACCAATATTTTGGAAGCCTATTTCATTGGGCAATCAGTTTGCTGTAATGTAGCCAATATTAACGGTGAAACTGGCAGAGTAACAGTCTCTCTAAAGCAGACATCTTGTTCTTCAGCAGATGCATACATGCTGCTACAACATTGCTGCCAAGAAATCCAACCAACTTTCCGTCAACACAACATGTTGCATCACCAAGACCACCATAGCCATGAATCGCTACCCTCAATTTTCCTTGCCCTGCTGATGGAGACAAATGGTGTTGATCATGTTGCCGAAGGGTTGTACCGCTGGCTGTGA 918 0.4194 MLQVGPAGNKCLASSNHNPAVSIHQHPTIFVGILDKDLSHRTLLQYLKLYSTGYRQEAYNMQLFWITMLDTVWQSLVLFYTPLFTYKDSSIDIWSMGSLWAIAVVILVNVHLADHHGQATLMKSVLKPGYNFDQLLVLDFKGNNLILSAKSSLIKYAQQIPADISQMHPNSVVHGYIGNIIETGCFVRFLGQLTGFSPRNKAADDQKTNILEAYFIGQSVCCNVANINGETGRVTVSLKQTSCSSADAYMLLQHCCQEIQPTFRQHNMLHHQDHHSHESLPSIFLALLMETNGVDHVAEGLYRWL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1131 305 PANTHER BNAANNG09370D PROTEIN 72 252 - -
Psa2g1131 305 Pfam Phospholipid-translocating P-type ATPase C-terminal 27 114 IPR032630 -
Psa2g1131 305 Gene3D - 165 246 IPR012340 -
Psa2g1131 305 PANTHER PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5 72 252 IPR045209 GO:0006364
Psa2g1131 305 SUPERFAMILY Nucleic acid-binding proteins 151 245 IPR012340 -
Psa2g1131 305 ProSiteProfiles S1 domain profile. 170 239 IPR003029 GO:0003676
Psa2g1131 305 SMART S1_6 168 239 IPR022967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1131 Psa-Chr2 84842109 84843026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1131 27 113 Primary Pumps ATPases AT5G04930 55.172 2.68e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1131 K14792 - gmx:100797745 239.195