Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1071 ATGGAAGCAACACGTGAGATTGAGATTTCCACAAACGGAAAAGATCAAAGCTGGTATCTTTTCCACCATCAAGAACGACCCGCAATGTCTTTCTCTCTCACTGACGGTTGCAAGAAGAGAAAACGGTGGCCCAAGATTTTCCGGCTACAATCCTTCGCAGACCCTGGGTGTCCGATTTCACCTTCAGGCTCTTTCCGTGAAAACGTTCGGTTCTTTCTTCAAGAAGCTGGTGAGCCTGAAGATTACACGGTTTTGGGTAATCCTCTTTGGTCCACGTTTCTCATTCATGATAAGAGTAACCTAATGGCTCCGTTCTATACTCTTGAAGAACAAGTTTACAACTCTTCTCATCCCTTCTGTGATCATTGCCGTTGTGTAGGTTGGAGTGGCCACTTTGTATCAAAGAGAAGGTACCATTTTATAATTCCGATGGACAATGCGTGGCATAAACCGTTAAACGAAGAAGCTCTAGATAATCAAAGTCATCTGTTACATGGTGTGATTCATTGCAATGGTTATGGCCATTTGGTATGTCTTAATGGCATTGAAGGTGGTTCCAAATTTCTCAGTGGGAGAGAGATCATGGATCTATGGGACAGAATTTGTAGCAATCTTAGAGCAAGGCAAATTGCAGTAGAAGATGCTTCAAGGAAAAGGTCAATGGATCTTCGATTATTACATGGAGTTGCTTATGGTCATTCTTGGTTTGGTAGATGGGGCTATAGATTTTGCCGTGGAAGCTTTGGTGCAACAGAACAAAACTACTATGAAGCAATTGAAACTCTCGGTTCGTTAGTTCTTGACGAGATTGCAAGAGATTTGAGTAAGACAAAGTGCCATAAAGATATAAAACAGATGATTCGTTTCTATAGAGATATGAGTGAAACACAAATTATCACAATTAGAGAGCTTCTCAGATTCATGCTCACTGTCAAGTCTCGTCGACCCGTGTCAAAGATAACAATCACTTGTTCTTCTGGTTCTAATTCTGCTTCTGCTTCACCTTCTTATTCTACTACAACATTTCTGTCAAGAAATTCAACCAAACATGCACTTTCATGTAGTAGATCAGATTCCATGAGTAAGGAAAAATCAGCAAGGTATAAGAAATTCAGCACAGCAGTGGTGAATATGGATAGTAGATGGCCAACAAGGAGACTAGAGTTTGCAGCTCAAGTGATTGTTGATGCATTGAAAGAAGACAAAGCTACGAAATCAGGATCTAGTGGAATGACAAGACAAGATGTGAGGGATGCAGCTAGGCTTCACATTGGTGACACAGGTTTACTTGATTATGTGCTGAAATCATTGAACAATGTGATTGTTGGAAACTATGTCGTTCGCCGCATGGTTAACCCTTCATCAAGGATCCTTGAGTATACCATTCATGAGCTTGGGAAAGGGTTCAAGGCACCTGAAGTGGAACATGGAGTAATGACAGTTGCGGATAATCCTCAAGTAGATTCATCATCGTCAATGTCATCAGCTTTGTCTTTAACTCCTGGTAATGATGTTTACAGCGATGTAGTTTACCTCTACAAGAACGTGTTGTTGGGCTATCCAGACTCAGAGGCGGTGGAATTAGCAGTTCAAACAATTCTTGACTGCAGACACTTTGTGAAAGAGTGGGAATTGAGAGATGAAATGGAACAGGTTCTGACATTTATTTGCCGTCTGAAACCAAATTTCATCGAGAATAAAGCTGATTTAAAAGGGCCAACTTGTGGTGAGCTTGTAACTGTTCCATTGCACGCCACTGTTAGAGACTTGAAACAAGCTGCTGAAGCTGCTTTAAGGGATACTTATTGCATAGCTGAAAGACTCATAGTGACAGATATAAAAGAACTGATGGGTGTGGATGATAGCGAAGTGATTTTCGGGTTGATTGAATCAGGTGTGAAGCTTTGTGTTAGAGGAATTAGTATAGACTTGTGTACACCATTGAAATATCAAGGAGGGTCTGATAACTGGAAGGTGAGGTGTGAGTGTGGAGCACAGGATGATGATGGTGAGAGAATGGTGGCTTGTGATATTTGTGAGGTGTGGCAGCATACAAGATGTTGTGGAATAGATGATACTGAGACTGTTCCACCATTGTTTGTGTGTACTGGATGCTGTGATTCACTTATGCCACCAAGGATTGAATCTAGAAGCTATGATATGGTGGATTGTGCTGATGTATTTCTGGTTTCACCTGAGCCTACTCATTTGCTTGAGTATGGTTATGGGTACTGA 2235 0.4134 MEATREIEISTNGKDQSWYLFHHQERPAMSFSLTDGCKKRKRWPKIFRLQSFADPGCPISPSGSFRENVRFFLQEAGEPEDYTVLGNPLWSTFLIHDKSNLMAPFYTLEEQVYNSSHPFCDHCRCVGWSGHFVSKRRYHFIIPMDNAWHKPLNEEALDNQSHLLHGVIHCNGYGHLVCLNGIEGGSKFLSGREIMDLWDRICSNLRARQIAVEDASRKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGATEQNYYEAIETLGSLVLDEIARDLSKTKCHKDIKQMIRFYRDMSETQIITIRELLRFMLTVKSRRPVSKITITCSSGSNSASASPSYSTTTFLSRNSTKHALSCSRSDSMSKEKSARYKKFSTAVVNMDSRWPTRRLEFAAQVIVDALKEDKATKSGSSGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPSSRILEYTIHELGKGFKAPEVEHGVMTVADNPQVDSSSSMSSALSLTPGNDVYSDVVYLYKNVLLGYPDSEAVELAVQTILDCRHFVKEWELRDEMEQVLTFICRLKPNFIENKADLKGPTCGELVTVPLHATVRDLKQAAEAALRDTYCIAERLIVTDIKELMGVDDSEVIFGLIESGVKLCVRGISIDLCTPLKYQGGSDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDTETVPPLFVCTGCCDSLMPPRIESRSYDMVDCADVFLVSPEPTHLLEYGYGY* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1071 744 SUPERFAMILY FYVE/PHD zinc finger 653 712 IPR011011 -
Psa2g1071 744 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 648 709 IPR013083 -
Psa2g1071 744 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 39 713 - -
Psa2g1071 744 SMART PHD_3 660 706 IPR001965 -
Psa2g1071 744 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 39 713 - -
Psa2g1071 744 ProSitePatterns Zinc finger PHD-type signature. 661 705 IPR019786 -
Psa2g1071 744 CDD PHD_MMD1_like 661 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1071 Psa-Chr2 80237448 80240421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1071 38 711 PHD Transcription Factor Family AT5G22260 32.402 1.10e-117 367