Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1070 ATGTTGAATATTTACTGTATAAACTGCAAAGTATCTGCTTGTAAGTATTGTCTGTCCGCAGGGCATCATCAAAATCATCAGATACTTCAAGTTTTCAGAAATGTTTACAAGGATGTTGTCTGCCTTGCTGCTCTGGAAACTTATATTGACTGCTCAAAAATCCAGCCGTTCAAATGCAACAAAAGGCTGGTTTTGAATTGTCTTCCACTCTGTGGATCAACATCTGATGACGCGGCATCATGCAACATCAGCAGAAAGTCGAAAGAAGCCCAGTCGTATCAGTACTGCTCCATTGCTTGCATGGTAAAATCTGTTTCAAGAAAATCTGATGATTCAGTTCCTTCCATCAGTTCCATCCAAGCTCCGTCTCATGAATCACGGGTGGAAATTTCTGAGCCTTCCAAGCGAAAAAGGAAACGGAAAGGAACACCTCACAGAGCTCCATTATTCTAG 453 0.415 MLNIYCINCKVSACKYCLSAGHHQNHQILQVFRNVYKDVVCLAALETYIDCSKIQPFKCNKRLVLNCLPLCGSTSDDAASCNISRKSKEAQSYQYCSIACMVKSVSRKSDDSVPSISSIQAPSHESRVEISEPSKRKRKRKGTPHRAPLF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1070 150 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 2 150 - -
Psa2g1070 150 SUPERFAMILY B-box zinc-binding domain 2 30 - -
Psa2g1070 150 Pfam PLATZ transcription factor 33 102 IPR006734 -
Psa2g1070 150 MobiDBLite consensus disorder prediction 105 150 - -
Psa2g1070 150 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 150 - -
Psa2g1070 150 MobiDBLite consensus disorder prediction 108 127 - -
Psa2g1070 150 ProSiteProfiles Zinc finger B-box type profile. 1 31 IPR000315 GO:0008270
Psa2g1070 150 Gene3D Classic Zinc Finger 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1070 Psa-Chr2 80233307 80237219 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa2g1070 PLATZ 4.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1070 - - mtr:MTR_5g077740 176.792