Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1055 ATGAAACTAAGCATTGATCTTGAAGTGGAAGCTTATGCAGAATATGAATCTGATATCACAAGCCAAGTTGCTTCCAATCTATCAACTCAAGAAGCCTCTTCCAACATCACAAACCCTAACTACGATGATATCTCTCTCGAGTTATCTCTCAATTTCAAGAACAACGAGGCACCGACAGCAAGAGATTCAAATTCAATAGGGTTCTCACTCTCAAGCACTTCTGAGAGCAGCAATGAGCCTGCATCCGCAACAGTTCCAAGAGTTTTCTCTTGCAATTACTGTCAGAGAAAGTTTTTCAGCTCACAAGCTCTTGGTGGACACCAAAATGCACACAAAAGAGAAAGAACATTGGCCAAAAGAGCTATGAGAATGGGAGTTTTTTCTGATAGGTATAATGCTAGTTTAGCATCTCTACCTTTGCATGGTTCTTTTAGATCATTAGGGATAAAAACACACTCTTCAATGCATTATGGTTTCTCAGTACCAACAACAATTAGGCCTCATCATCAACAAGGGTGTGTTCGATTTCCGATATTCTTGGAACATGAGGAGTCGGAGTTGTTGTGGCCTGGTAGTTTTCGAAAGGCGTCGGAGGAGGGTGATGGACAAGAGAATTTCATAATCACTGAGGTGAATCCATCTGTGGACATAGAAAAATCTACACCAGATTTGACATTGAAACTTTGA 687 0.4061 MKLSIDLEVEAYAEYESDITSQVASNLSTQEASSNITNPNYDDISLELSLNFKNNEAPTARDSNSIGFSLSSTSESSNEPASATVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGVFSDRYNASLASLPLHGSFRSLGIKTHSSMHYGFSVPTTIRPHHQQGCVRFPIFLEHEESELLWPGSFRKASEEGDGQENFIITEVNPSVDIEKSTPDLTLKL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1055 228 PANTHER ZINC FINGER PROTEIN 3-RELATED 1 228 - -
Psa2g1055 228 PANTHER ZINC FINGER PROTEIN JAGGED 1 228 IPR045320 GO:0003700
Psa2g1055 228 SUPERFAMILY beta-beta-alpha zinc fingers 87 116 IPR036236 -
Psa2g1055 228 Gene3D Classic Zinc Finger 68 135 - -
Psa2g1055 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Psa2g1055 228 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1055 Psa-Chr2 79030870 79032691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1055 71 228 C2H2 Transcription Factor Family AT1G66140 47.959 1.94e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa2g1055 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1055 - - gmx:100788768 290.041