Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1047 ATGGTTAAGCACAACAATGTTATCCCCAATGAACATTTTCGTAAACATTGGCAAAACTACGTGAAGACATGGTTTAATCAACCAGCAAGGAAGACCAGAAGACGCTTGGCTCGCCAAAAGAAGGCAGTTAAGATTTTCCCCAGGCCTACTGCTGGACCTCTTAGGCCAATTGTTCATGGACAAACTGCCAAATACAACATGAAACTCCGAGCTGATCATCGTCGCAGGAACCGTTCTTTGGAGGGTCTTCAAGCTAATGTGCAGAGGCTGAAGACATACAAGGCCAAGTTGGTTGTATTCCCAAGACGTGGACGCAAGACCAAGGCTGGTGACTCTACACCTGAGGAACTTGCTAATGCCACACAAGTCCAGGGATCATACTTGCCAATTGTGAGGGAGAAGCCAGCCGTTGAACTTGTTAAAATTATTGATGAAATGAAGGCATTCAAAGCTTATTACAAGCTCCGCCTTGAACGCACAAACAAGCGTCACCTTGGTGCTCAGCTCAAGAGGGCCGCTGAGGCAGAAAAGGAAGACAACAAGAAGAGACGATCAAATGGAAACGCTACAAGCCAAAGCCATTCCTGCGTTAACCAATTTTCACTGCAGTAA 612 0.4608 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRADHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKIIDEMKAFKAYYKLRLERTNKRHLGAQLKRAAEAEKEDNKKRRSNGNATSQSHSCVNQFSLQ* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1047 203 PANTHER 60S RIBOSOMAL PROTEIN L13 72 181 - -
Psa2g1047 203 PANTHER 60S RIBOSOMAL PROTEIN L13 1 71 - -
Psa2g1047 203 PANTHER 60S RIBOSOMAL PROTEIN L13 1 71 IPR001380 GO:0003735|GO:0005840|GO:0006412
Psa2g1047 203 PANTHER 60S RIBOSOMAL PROTEIN L13 72 181 IPR001380 GO:0003735|GO:0005840|GO:0006412
Psa2g1047 203 MobiDBLite consensus disorder prediction 169 203 - -
Psa2g1047 203 Gene3D - 141 183 - -
Psa2g1047 203 Pfam Ribosomal protein L13e 72 159 IPR001380 GO:0003735|GO:0005840|GO:0006412
Psa2g1047 203 Pfam Ribosomal protein L13e 7 71 IPR001380 GO:0003735|GO:0005840|GO:0006412
Psa2g1047 203 MobiDBLite consensus disorder prediction 169 185 - -
Psa2g1047 203 MobiDBLite consensus disorder prediction 186 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1047 Psa-Chr2 78677777 78679132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1047 2 166 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 72.775 8.06e-100 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1047 K02873 - gmx:100805957 324.324