Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1044 ATGAAGAAAAACATCATAGTACTAAACCCTTTAACTTTTTCTTTCTTCCTCTTCATTATTACCCTCTTCACTCACTCCCAAAACGACGACGCTTCAGTCATGTTATCTCTCAAAAGAAATATCAACCCGCCCGCTTCACTCGGTTGGTCCGACCCGGATCCATGTAAATGGACCCACGTTTCATGCTCCGGCGATAACCGGGTTACTCGAATCCAAATCGGTCGTCAGAATCTCCACGGCACAATCCCTCGGAGCCTCAACAACTTAACCGAGTTACAACACTTGGAGCTTCAGTTCAACAATTTCTCGGGTCCTCTCCCGAGTTTAAACGGGTTAAACTCTCTTCAAGTTTTCATGGCGAGTAGTAACCGTTTTACAGTGATTCCCGGCGATTTTTTTGCTGGTATGTCTCAGCTTGTTTCTGTAGAGATCGATGATAATCCTTTTGAGCCTTGGGAGATTCCCGTGTCTCTTAAAGATGCTTCTTCGCTTCAGAATTTTTCTGCTAACAATGCTAATGTGAAGGGTAAGTTACCGGATTTTTTGGGTGATGATGTTTTTCCTGTTCTGACCCTTTTGCATTTAGCCTTCAATAATCTTGAGGGTGTGTTGCCGAAGAGCTTTTCTGGTTTAAAGGTTGAGTCTTTGTGGTTGAATGGTCAGAAGAGTGATGGTAAGCTTACTGGGTCGGTTGAGGTTTTGCAGAATATGACTTCTTTGACTGAGGTTTGGTTGCATTCTAATGCTTTTAACGGTCCTTTACCTGGTTTTGAAGGGTTGAAGGATTTAGAGGTTTTGAGTTTAAGAGATAACTCTTTCACTGGTGTTGTTCCCAGTTCATTGGTTAGCTTGAAGTCGCTTAAAGTTGTGAACTTGACTAATAACTTGTTTCAGGGTCCTGTGCCTGATTTTGGTGCTGGGGTTGAGGTTGATAATGTTAAGGATTCTAATAGCTTTTGTTTGTCTAGTCCTGGTGATTGTGATCCTAGGGTGCAGGTGCTTCTTTCTATTGTTGGGGTTATGGGTTATCCTTTGAAGTTTGCTGAGAGTTGGAAGGGGAATGATCCTTGTGTTAATTGGATTGGGATTACTTGTAGTGATGGGAACATTAGTGTTGTTAATTTTCAAAAGATGGGTCTTAGCGGTGTGATATCTCCGGAGTTTGCTAAGCTTAAGTCGCTGCAAAGACTTATTCTGTCCGATAACAATATCACGGGTTTGATTCCTAATGAGCTTACTACTTTGCCTATGCTAACTCAGTTGAATGTTGCAAACAATCATCTCTATGGAAAAACACCTAGTTTTAAGAGGAATGTAGTTGTGACTACTAGTGGGAACATTGATATGGGGAAGGATAAGAGCAGTCTTTCACCTCAGGGTTCACTGTCTCCTAATGGTACCGATGTGAGTGACGGAAATGGTGGGAGTTCTGGAAATGGCGGCAAAAAGTCTTCGTCTCGTGTAGGATTGATTGTGTTTGCTGTTGTTGGTGCTGTTTTTGTGGCCTCTTTGATTGGTTTCTTTGTTTTCTGCTTGCTAAGGTTGAAGCAAAAGAAGTTAAGTAGGGTTCAGAGTCCGAATGCACTAGTTATTCACCCTCGACATTCTGGATCGGATAACGAAAGTGTGAAGATAACAGTTGCAGGTTCGAGTGTCAGTGTTGGAGGTGTGAGTGAAGGCCACGCTGTGCCCAATGGTGAGGTGGGAGATATTCAAATGGTTGAAGCGGGAAACATGGTCATTTCAATACAGGTTTTAAGGAGTGTTACAAACAATTTCAGCGAGAAAAATATATTGGGACAAGGAGGTTTTGGAACGGTTTATAAAGGTGAACTCCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTGGGGCAATAGCCGGCAAGGGTGCGTCAGAATTTAAGTCTGAAATTGCTGTTTTGACAAAGGTTCGTCACCGTCATCTTGTTGCTCTTCTCGGATACTGCTTGGATGGGAACGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGGACCTTAAGTAGATATATTTTTAATTGGCCGGATGAAGGGCTCGAACCACTTGCGTGGAATAGGAGATTGATCATTGCCTTAGATGTCGCCAGGGGTGTTGAGTACCTTCATAGCTTGGCTCATCAAAGCTTCATACACAGAGACTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCCAAGGTCGCAGATTTTGGTCTTGTGCGTCTCGCTCCCGAAGGGAAAGCCTCAATTGAAACAAGAATTGCAGGAACTTTTGGATATTTAGCTCCGGAATATGCAGTTACCGGCCGTGTGACAACTAAAGTTGACGTGTTCAGCTTTGGAGTAATATTGATGGAGCTGATAACCGGAAGAAAAGCACTTGACGAGAGCCAACCTGAGGATAGCATGCACCTTGTAGCATGGTTCCGAAGAATGTACTTAGATAAGGACTCATTCCGCAAGTCCATCGACCCCACAATTGACATCAACGAGGAAACACTCGCTAGTATTCACACCGTAGCAGAGTTAGCTGGTCACTGCAGTGCAAGGGAGCCATATCAAAGACCAGACATGGGACACGCGGTTAACGTGCTTTCGTCTCTTGTTGAACAATGGAAACCATCTGATTCAAATTCCGAAGATATATATGGTATCGACCTTGACTTGTCTTTACCACAAGCACTCAAGAAATGGCAGGCTTATGAAGGTGCAAGTCAATTGGAGTCGACGTCTTCTTCTTCGCTTCTTCCAAGTTTGGATAACACGCAAACAAGTATACCTACTCGTCCATATGGATTTGCCGATTCTTTCACGTCGGCCGATGGTAGATGA 2844 0.4342 MKKNIIVLNPLTFSFFLFIITLFTHSQNDDASVMLSLKRNINPPASLGWSDPDPCKWTHVSCSGDNRVTRIQIGRQNLHGTIPRSLNNLTELQHLELQFNNFSGPLPSLNGLNSLQVFMASSNRFTVIPGDFFAGMSQLVSVEIDDNPFEPWEIPVSLKDASSLQNFSANNANVKGKLPDFLGDDVFPVLTLLHLAFNNLEGVLPKSFSGLKVESLWLNGQKSDGKLTGSVEVLQNMTSLTEVWLHSNAFNGPLPGFEGLKDLEVLSLRDNSFTGVVPSSLVSLKSLKVVNLTNNLFQGPVPDFGAGVEVDNVKDSNSFCLSSPGDCDPRVQVLLSIVGVMGYPLKFAESWKGNDPCVNWIGITCSDGNISVVNFQKMGLSGVISPEFAKLKSLQRLILSDNNITGLIPNELTTLPMLTQLNVANNHLYGKTPSFKRNVVVTTSGNIDMGKDKSSLSPQGSLSPNGTDVSDGNGGSSGNGGKKSSSRVGLIVFAVVGAVFVASLIGFFVFCLLRLKQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVSVGGVSEGHAVPNGEVGDIQMVEAGNMVISIQVLRSVTNNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMECGAIAGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRYIFNWPDEGLEPLAWNRRLIIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEDSMHLVAWFRRMYLDKDSFRKSIDPTIDINEETLASIHTVAELAGHCSAREPYQRPDMGHAVNVLSSLVEQWKPSDSNSEDIYGIDLDLSLPQALKKWQAYEGASQLESTSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1044 947 MobiDBLite consensus disorder prediction 912 947 - -
Psa2g1044 947 MobiDBLite consensus disorder prediction 450 481 - -
Psa2g1044 947 SMART serkin_6 593 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1044 947 SUPERFAMILY L domain-like 36 305 - -
Psa2g1044 947 CDD STKc_IRAK 599 872 - -
Psa2g1044 947 MobiDBLite consensus disorder prediction 912 936 - -
Psa2g1044 947 PANTHER OSJNBA0070M12.3 PROTEIN 19 947 - -
Psa2g1044 947 ProSiteProfiles Protein kinase domain profile. 593 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1044 947 SUPERFAMILY Protein kinase-like (PK-like) 569 877 IPR011009 -
Psa2g1044 947 PANTHER RECEPTOR PROTEIN KINASE TMK1 19 947 - -
Psa2g1044 947 Gene3D Ribonuclease Inhibitor 27 327 IPR032675 -
Psa2g1044 947 Pfam Leucine rich repeat N-terminal domain 331 366 IPR013210 -
Psa2g1044 947 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Psa2g1044 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Psa2g1044 947 Gene3D Transferase(Phosphotransferase) domain 1 671 892 - -
Psa2g1044 947 SMART LRR_typ_2 112 135 IPR003591 -
Psa2g1044 947 SMART LRR_typ_2 391 414 IPR003591 -
Psa2g1044 947 SMART LRR_typ_2 260 283 IPR003591 -
Psa2g1044 947 SMART LRR_typ_2 187 210 IPR003591 -
Psa2g1044 947 SUPERFAMILY L domain-like 330 435 - -
Psa2g1044 947 Pfam Protein kinase domain 594 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1044 947 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Psa2g1044 947 ProSitePatterns Protein kinases ATP-binding region signature. 599 631 IPR017441 GO:0005524
Psa2g1044 947 Pfam Leucine rich repeat 387 428 IPR001611 GO:0005515
Psa2g1044 947 Gene3D Phosphorylase Kinase; domain 1 558 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1044 Psa-Chr2 78647229 78651776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1044 71 874 Receptor kinase-like Gene Family AT5G07280 30.109 6.98e-81 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Psa2g1044 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1044 K00924 - aprc:113846741 1508.43