Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g1044 | ATGAAGAAAAACATCATAGTACTAAACCCTTTAACTTTTTCTTTCTTCCTCTTCATTATTACCCTCTTCACTCACTCCCAAAACGACGACGCTTCAGTCATGTTATCTCTCAAAAGAAATATCAACCCGCCCGCTTCACTCGGTTGGTCCGACCCGGATCCATGTAAATGGACCCACGTTTCATGCTCCGGCGATAACCGGGTTACTCGAATCCAAATCGGTCGTCAGAATCTCCACGGCACAATCCCTCGGAGCCTCAACAACTTAACCGAGTTACAACACTTGGAGCTTCAGTTCAACAATTTCTCGGGTCCTCTCCCGAGTTTAAACGGGTTAAACTCTCTTCAAGTTTTCATGGCGAGTAGTAACCGTTTTACAGTGATTCCCGGCGATTTTTTTGCTGGTATGTCTCAGCTTGTTTCTGTAGAGATCGATGATAATCCTTTTGAGCCTTGGGAGATTCCCGTGTCTCTTAAAGATGCTTCTTCGCTTCAGAATTTTTCTGCTAACAATGCTAATGTGAAGGGTAAGTTACCGGATTTTTTGGGTGATGATGTTTTTCCTGTTCTGACCCTTTTGCATTTAGCCTTCAATAATCTTGAGGGTGTGTTGCCGAAGAGCTTTTCTGGTTTAAAGGTTGAGTCTTTGTGGTTGAATGGTCAGAAGAGTGATGGTAAGCTTACTGGGTCGGTTGAGGTTTTGCAGAATATGACTTCTTTGACTGAGGTTTGGTTGCATTCTAATGCTTTTAACGGTCCTTTACCTGGTTTTGAAGGGTTGAAGGATTTAGAGGTTTTGAGTTTAAGAGATAACTCTTTCACTGGTGTTGTTCCCAGTTCATTGGTTAGCTTGAAGTCGCTTAAAGTTGTGAACTTGACTAATAACTTGTTTCAGGGTCCTGTGCCTGATTTTGGTGCTGGGGTTGAGGTTGATAATGTTAAGGATTCTAATAGCTTTTGTTTGTCTAGTCCTGGTGATTGTGATCCTAGGGTGCAGGTGCTTCTTTCTATTGTTGGGGTTATGGGTTATCCTTTGAAGTTTGCTGAGAGTTGGAAGGGGAATGATCCTTGTGTTAATTGGATTGGGATTACTTGTAGTGATGGGAACATTAGTGTTGTTAATTTTCAAAAGATGGGTCTTAGCGGTGTGATATCTCCGGAGTTTGCTAAGCTTAAGTCGCTGCAAAGACTTATTCTGTCCGATAACAATATCACGGGTTTGATTCCTAATGAGCTTACTACTTTGCCTATGCTAACTCAGTTGAATGTTGCAAACAATCATCTCTATGGAAAAACACCTAGTTTTAAGAGGAATGTAGTTGTGACTACTAGTGGGAACATTGATATGGGGAAGGATAAGAGCAGTCTTTCACCTCAGGGTTCACTGTCTCCTAATGGTACCGATGTGAGTGACGGAAATGGTGGGAGTTCTGGAAATGGCGGCAAAAAGTCTTCGTCTCGTGTAGGATTGATTGTGTTTGCTGTTGTTGGTGCTGTTTTTGTGGCCTCTTTGATTGGTTTCTTTGTTTTCTGCTTGCTAAGGTTGAAGCAAAAGAAGTTAAGTAGGGTTCAGAGTCCGAATGCACTAGTTATTCACCCTCGACATTCTGGATCGGATAACGAAAGTGTGAAGATAACAGTTGCAGGTTCGAGTGTCAGTGTTGGAGGTGTGAGTGAAGGCCACGCTGTGCCCAATGGTGAGGTGGGAGATATTCAAATGGTTGAAGCGGGAAACATGGTCATTTCAATACAGGTTTTAAGGAGTGTTACAAACAATTTCAGCGAGAAAAATATATTGGGACAAGGAGGTTTTGGAACGGTTTATAAAGGTGAACTCCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTGGGGCAATAGCCGGCAAGGGTGCGTCAGAATTTAAGTCTGAAATTGCTGTTTTGACAAAGGTTCGTCACCGTCATCTTGTTGCTCTTCTCGGATACTGCTTGGATGGGAACGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGGACCTTAAGTAGATATATTTTTAATTGGCCGGATGAAGGGCTCGAACCACTTGCGTGGAATAGGAGATTGATCATTGCCTTAGATGTCGCCAGGGGTGTTGAGTACCTTCATAGCTTGGCTCATCAAAGCTTCATACACAGAGACTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCCAAGGTCGCAGATTTTGGTCTTGTGCGTCTCGCTCCCGAAGGGAAAGCCTCAATTGAAACAAGAATTGCAGGAACTTTTGGATATTTAGCTCCGGAATATGCAGTTACCGGCCGTGTGACAACTAAAGTTGACGTGTTCAGCTTTGGAGTAATATTGATGGAGCTGATAACCGGAAGAAAAGCACTTGACGAGAGCCAACCTGAGGATAGCATGCACCTTGTAGCATGGTTCCGAAGAATGTACTTAGATAAGGACTCATTCCGCAAGTCCATCGACCCCACAATTGACATCAACGAGGAAACACTCGCTAGTATTCACACCGTAGCAGAGTTAGCTGGTCACTGCAGTGCAAGGGAGCCATATCAAAGACCAGACATGGGACACGCGGTTAACGTGCTTTCGTCTCTTGTTGAACAATGGAAACCATCTGATTCAAATTCCGAAGATATATATGGTATCGACCTTGACTTGTCTTTACCACAAGCACTCAAGAAATGGCAGGCTTATGAAGGTGCAAGTCAATTGGAGTCGACGTCTTCTTCTTCGCTTCTTCCAAGTTTGGATAACACGCAAACAAGTATACCTACTCGTCCATATGGATTTGCCGATTCTTTCACGTCGGCCGATGGTAGATGA | 2844 | 0.4342 | MKKNIIVLNPLTFSFFLFIITLFTHSQNDDASVMLSLKRNINPPASLGWSDPDPCKWTHVSCSGDNRVTRIQIGRQNLHGTIPRSLNNLTELQHLELQFNNFSGPLPSLNGLNSLQVFMASSNRFTVIPGDFFAGMSQLVSVEIDDNPFEPWEIPVSLKDASSLQNFSANNANVKGKLPDFLGDDVFPVLTLLHLAFNNLEGVLPKSFSGLKVESLWLNGQKSDGKLTGSVEVLQNMTSLTEVWLHSNAFNGPLPGFEGLKDLEVLSLRDNSFTGVVPSSLVSLKSLKVVNLTNNLFQGPVPDFGAGVEVDNVKDSNSFCLSSPGDCDPRVQVLLSIVGVMGYPLKFAESWKGNDPCVNWIGITCSDGNISVVNFQKMGLSGVISPEFAKLKSLQRLILSDNNITGLIPNELTTLPMLTQLNVANNHLYGKTPSFKRNVVVTTSGNIDMGKDKSSLSPQGSLSPNGTDVSDGNGGSSGNGGKKSSSRVGLIVFAVVGAVFVASLIGFFVFCLLRLKQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVSVGGVSEGHAVPNGEVGDIQMVEAGNMVISIQVLRSVTNNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMECGAIAGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRYIFNWPDEGLEPLAWNRRLIIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEDSMHLVAWFRRMYLDKDSFRKSIDPTIDINEETLASIHTVAELAGHCSAREPYQRPDMGHAVNVLSSLVEQWKPSDSNSEDIYGIDLDLSLPQALKKWQAYEGASQLESTSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR* | 948 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g1044 | 947 | MobiDBLite | consensus disorder prediction | 912 | 947 | - | - | |
Psa2g1044 | 947 | MobiDBLite | consensus disorder prediction | 450 | 481 | - | - | |
Psa2g1044 | 947 | SMART | serkin_6 | 593 | 873 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g1044 | 947 | SUPERFAMILY | L domain-like | 36 | 305 | - | - | |
Psa2g1044 | 947 | CDD | STKc_IRAK | 599 | 872 | - | - | |
Psa2g1044 | 947 | MobiDBLite | consensus disorder prediction | 912 | 936 | - | - | |
Psa2g1044 | 947 | PANTHER | OSJNBA0070M12.3 PROTEIN | 19 | 947 | - | - | |
Psa2g1044 | 947 | ProSiteProfiles | Protein kinase domain profile. | 593 | 873 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g1044 | 947 | SUPERFAMILY | Protein kinase-like (PK-like) | 569 | 877 | IPR011009 | - | |
Psa2g1044 | 947 | PANTHER | RECEPTOR PROTEIN KINASE TMK1 | 19 | 947 | - | - | |
Psa2g1044 | 947 | Gene3D | Ribonuclease Inhibitor | 27 | 327 | IPR032675 | - | |
Psa2g1044 | 947 | Pfam | Leucine rich repeat N-terminal domain | 331 | 366 | IPR013210 | - | |
Psa2g1044 | 947 | Pfam | Leucine rich repeat N-terminal domain | 28 | 63 | IPR013210 | - | |
Psa2g1044 | 947 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 718 | 730 | IPR008271 | GO:0004672|GO:0006468 | |
Psa2g1044 | 947 | Gene3D | Transferase(Phosphotransferase) domain 1 | 671 | 892 | - | - | |
Psa2g1044 | 947 | SMART | LRR_typ_2 | 112 | 135 | IPR003591 | - | |
Psa2g1044 | 947 | SMART | LRR_typ_2 | 391 | 414 | IPR003591 | - | |
Psa2g1044 | 947 | SMART | LRR_typ_2 | 260 | 283 | IPR003591 | - | |
Psa2g1044 | 947 | SMART | LRR_typ_2 | 187 | 210 | IPR003591 | - | |
Psa2g1044 | 947 | SUPERFAMILY | L domain-like | 330 | 435 | - | - | |
Psa2g1044 | 947 | Pfam | Protein kinase domain | 594 | 866 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g1044 | 947 | Gene3D | Ribonuclease Inhibitor | 329 | 453 | IPR032675 | - | |
Psa2g1044 | 947 | ProSitePatterns | Protein kinases ATP-binding region signature. | 599 | 631 | IPR017441 | GO:0005524 | |
Psa2g1044 | 947 | Pfam | Leucine rich repeat | 387 | 428 | IPR001611 | GO:0005515 | |
Psa2g1044 | 947 | Gene3D | Phosphorylase Kinase; domain 1 | 558 | 670 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g1044 | Psa-Chr2 | 78647229 | 78651776 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g1044 | 71 | 874 | Receptor kinase-like Gene Family | AT5G07280 | 30.109 | 6.98e-81 | 283 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Psa2g1044 | Pkinase | 2.7e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g1044 | K00924 | - | aprc:113846741 | 1508.43 |