Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1020 ATGAACAAAAACAAAGCCGAAGCAGATCAGTTACTGGAAATTGGAGAAGAGCTCTTACAAAAACGAGATCTAAAAGGTTCAAGAGAAATGGCAGTTCTAGCTCAAGAAATTGACCCTCTTCTAGAAGGTTCCGACCAGATCATAGCAATCGTTGATGTTCTCGAAGCAGCTGAGAAGCCTCTAAATTTCAACAGCAACAATCTCGATTGGTACGCTATTCTCCAAATCAATCGAAATTTGTCACCAGATCTGAATCTCATAAGGAAACAGTATCGCACTCTTGCTCTTCTTCTTCATCCTGACAAGAACCGTTTTTCATTTGCTGAACTCGCTTTCAAGCTCGTTTCCGATGCTTGGGCCGTTTTGTCAGATCCGGCTCAAAAGGCACGTTATGACAAGGGTTTTGAATTTGAGGAGAAGGGTTTGGAAAATGGAACGGTTAATTTTTGGACTGTTTGTCCTTATTGTTACCGTTTGTATGAGTATTCTAAGGTTTATGAGGGTTGTTGTTTGATGTGTCAGAATTGTAACAAATCTTTTCATGGTGTTTCGATTCAGGCTCTTCCGCCAATTGTTCCTGGACAAGAAGCTTATTATGTTTCTTGGGGAATGTTTCCGATGGGTTTTGTGTTTGAGAGTTCAGAGAATGGTGGAGGTGGTGGTGATTCTACTACGCCAAAGGCATAG 687 0.4119 MNKNKAEADQLLEIGEELLQKRDLKGSREMAVLAQEIDPLLEGSDQIIAIVDVLEAAEKPLNFNSNNLDWYAILQINRNLSPDLNLIRKQYRTLALLLHPDKNRFSFAELAFKLVSDAWAVLSDPAQKARYDKGFEFEEKGLENGTVNFWTVCPYCYRLYEYSKVYEGCCLMCQNCNKSFHGVSIQALPPIVPGQEAYYVSWGMFPMGFVFESSENGGGGGDSTTPKA* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1020 228 Gene3D DnaJ domain 55 149 IPR036869 -
Psa2g1020 228 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 213 - -
Psa2g1020 228 ProSiteProfiles dnaJ domain profile. 69 135 IPR001623 -
Psa2g1020 228 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 213 - -
Psa2g1020 228 SMART dnaj_3 68 127 IPR001623 -
Psa2g1020 228 SUPERFAMILY Chaperone J-domain 65 149 IPR036869 -
Psa2g1020 228 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Psa2g1020 228 PRINTS DnaJ domain signature 91 106 IPR001623 -
Psa2g1020 228 PRINTS DnaJ domain signature 107 127 IPR001623 -
Psa2g1020 228 Pfam DnaJ domain 69 132 IPR001623 -
Psa2g1020 228 CDD DnaJ 69 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1020 Psa-Chr2 77572838 77573524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1020 2 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 50.420 4.77e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1020 - - mtr:MTR_3g100330 367.081