Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1017 ATGGAAACAATTTCCATATCATCCGCAACATTCACATCTGATCTGATCTCGTTGTACAAGCAGCTAGTTACCGACGTGATGGTTTTATCAGAAACAGCAACCCACATGGACGCTTCCGTCCATTCAACATTTGCATCTCGCTATGTCCGCACATCTCTCCCCAGGTTCAAGATGGGGGATCATTCGATTCCGAAGGAGGCTGCGTACCAGATTATTAACGATGAGCTGATGCTGGATGGTAACCCTAGGTTGAATCTTGCATCGTTTGTGACTACGTGGATGGAGCCTGAATGCGATAAACTCATTATGGCTTCAATTAACAAAAACTACGTCGACATGGATGAGTACCCTGTCACCACTGAACTGCAGAACCGTTGTGTTAACATGATAGCTCATCTTTTCAATGCACCACTTGAAGAGTCAGAACCTGCAGTTGGCGTTGGTACTGTTGGTTCATCAGAGGCAATAATGTTAGCAGGTTTGGCATTCAAGAGGAAGTGGCAAAACAGAAGGAAAGCTGAAGGGAAGTCTTGTGACAATCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTCGCGAGGTACTTTGAGGTGGAACTGAAAGAAGTGAAGCTGAGTGAAGGATACTATATAATGGATCCTGAAAAAGCTGTCGAAATGGTGGACGAGAACACCATTTGCGTCGCTGCTATTCTTGGTTCCACACTAAACGGAGAGTTTGAAGATGTCAAACGCTTAAACGATCTCCTATTAGAAAAAAACAACGAAACCGGTTGGGACACTCCAATCCATGTGGATGCCGCCAGTGGTGGATTCATTGCACCATTTCTCTACCCAGAACTTGAGTGGGACTTTCGTTTACCACTAGTGAAAAGTATTAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGTATTGGTTGGGTTATCTGGAGAAGCAAAGAAGACCTTCCTGATGAACTCATCTTTCATATTAACTACCTTGGAGCTGACCAACCCACCTTCACTCTCAATTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTGATTCGTCTGGGTCATGAGGGATATAGAAATGTGATGGAAAATTGTAAAGACAACATGATGGTACTTAAGGATGGACTGGAGAAAACGGGTCGGTTTGACATTGTATCTAAAGACGAAGGCGTACCATTAGTGGCCTTCACTTTGAAGGACCACAGCCAGTTTAACGAATTCCAAATTTCTGATATGCTGAGGCGCTTTGGTTGGATAGTGCCAGCATACACCATGCCACCAGATGCAGAACACGTGACAGTGCTCCGTGTTGTAATCAGGGAGGACTTTTCGCGTACCTTTGCAGAGCGCCTTGTCATTGATATCACCAAAGTTATCCACGAGCTGGATTTGGTTCCTGCAAAGGTAGTCAGTACCAGCACCATAACAGTTACCGAAGAAGAAGATGCAAATGATGCTGAACAAGTAACGATTGCTAAGAAGAGTGTTCTGGAGACTCAAAGGGAAGTCAGTACGGCTTGGAAGAAATTTGTGATGGACAAGAAGAAAACAAATGGTGTTTGTTAG 1590 0.4415 METISISSATFTSDLISLYKQLVTDVMVLSETATHMDASVHSTFASRYVRTSLPRFKMGDHSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKSCDNPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYIMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLLEKNNETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCKDNMMVLKDGLEKTGRFDIVSKDEGVPLVAFTLKDHSQFNEFQISDMLRRFGWIVPAYTMPPDAEHVTVLRVVIREDFSRTFAERLVIDITKVIHELDLVPAKVVSTSTITVTEEEDANDAEQVTIAKKSVLETQREVSTAWKKFVMDKKKTNGVC* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1017 529 Gene3D - 92 386 IPR015421 GO:0003824
Psa2g1017 529 PANTHER GLUTAMATE DECARBOXYLASE 27 529 IPR010107 GO:0004351|GO:0006536|GO:0030170
Psa2g1017 529 SUPERFAMILY PLP-dependent transferases 40 470 IPR015424 -
Psa2g1017 529 Gene3D - 27 91 - -
Psa2g1017 529 Gene3D - 387 474 - -
Psa2g1017 529 Pfam Pyridoxal-dependent decarboxylase conserved domain 64 407 IPR002129 GO:0016830|GO:0019752|GO:0030170
Psa2g1017 529 PANTHER GLUTAMATE DECARBOXYLASE 27 529 - -
Psa2g1017 529 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 42 470 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1017 Psa-Chr2 77417671 77421344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1017 27 529 Calmodulin-binding Proteins AT5G17330 83.698 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1017 K01580 - gmx:100791696 906.36