LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g1016	ATGTGTGATAAACATCATCCACCTGTCATGCTCAGTTTCCCATGGGATTCTCTCTTTCTCTCTCCTCTTCTTCCTTTTCTCCATTTTCACTCCTCTCTCTCTCTTGAAACTTTCACACCTTCGTTTTCAGTTCCTATTCTCACAACAAAACAAAAACATAAACATAGTATTCACCAATCAACAACAACATTAACAACACTCTCTTCAGTTTTCACTACTACTACTACTACTTCACTTCATTCTTCAATGTCTCTTCTTTCTTTCTTCTTTCTACCTTTAACATTCTTCTTCTTATTGGGTCTTTCGTTTTTCAATGTTTTCATAACCGCTTCCACTGAATTTGACTTTGGAACGTTAACTCTCACAAGCCTTAAGCTTCTCGGTGATGCTCATTTAAACAACGCCACCGTTACTCTCACACGTGACCTCACCGTTCCTTTCTCCGGCGCCGGTCAAGCTCTTTATTCCCGTCCTGTCAGATTCCGGCAACCGGGTATCAATTTTCCGGCGAGTTTTACCACTTTTTTCTCTTTCTCGGTTACCAATTTGAACCCTTCTTCCATTGGTGGTGGTCTTGCGTTTGTAATTACCCCTGATGATGATTCCCTCGGAGACGCCGGGGGTTATCTTGGTCTTGCTGCTGATGGGTTTGTAGCGGTTGAATTTGATACCCTAATGGACGTTGAATTTAAGGATATTAATGGGAACCATGTTGGGGTTGATCTTAATAGTGTTGTTTCGAATAAAGTTGGTGACTTGGATTCAATTGGGATCGATCTTAAGAGTGGTGACACGGTGAATGCGTGGATTGATTATGATGGATCCACTAATGAGTTTAATGTTTGGGTTTCTTATTCTAATCTTAAACCGAAAGATCCAATTTTGTCTATGAATCTTGATATGGGTCAGTACTTGAGTGATTTTATGTATGTTGGGTTTTCTGGTTCAACTCAAGGTAGTACAGAGATTCATAGGGTTGAATGGTGGAGTTTTAGCTCGTCTTTTGTTTCCTCGGGTGATCCTTCCAGTTTGCCGCCTCCTCCGGCTGTTAGTTTGATGAATACCACGGCGAGTTCAGCGAGGTCGCCGCCTCCTTCTATGGCTCCTTCGATGAATCATTCAAATGAAGAAAGAAAGGAGAGTAAGAAGAATTGTCACAATGGGTTGTGTAAGCAGGGTTTGGGAGCTGTTGCTGGTGTTGTTACTGCTGGGGCTTTTGTTTTAGCACTTTTTGCTGGCTCTATGATTTGGTTTTATTCTAAGAAAGTGAAGCGCGTGAGTAGATTTGATTCTCTTGGATCAGAGATAATCAAGATGCCTAAGCAGTTTAGCTACAAGGAGCTTAAAACTGCGACAAAGTGTTTCAATGCTAATAGGATTATTGGTCATGGTGCATTTGGGACTGTTTATAAGGGAATTTTGACTGAGAATGGTGACATTATTGCTGTGAAGAGGTGTAGTCATAGTAGTCAAGGTAAGAATGAGTTTTTATCTGAGTTGTCTATAATTGGTAGTCTTAGACATCGGAATCTTGTTAGACTTCAAGGATGGTGTCATGAGAAAGGTGAGATTTTGTTGGTGTATGATTTGATGCCTAATGGTAGTTTGGACAAGGCTTTGTTTGAAGCTAGAACGCCTCTTCCGTGGCCTCACCGCCGGAAGATTTTGTTGGGTGTGGCGTCTGCCTTGGCTTACTTGCATCAAGAGTGTGAAAATCAGGTGATTCATAGAGACATTAAGACTAGTAACATAATGTTAGATGAAGGTTTTAACGCGCGTTTGGGAGATTTCGGATTAGCTAGACAAACTGAGCATGACAAGTCTCCGGATGCCACGGTGGCTGCTGGAACAATGGGGTATCTAGCACCCGAGTATCTCCTTACAGGTAAAGCCACTGAGAAAACCGACGTGTTTAGTTATGGTGCTGTGGTTCTTGAGGTTGCAAGTGGGAGGAGACCCATAGAGAAAGATGCTGCAGGTGTTGGAAAAGTTGGAGTGAGTAGCAATTTGGTGGAATGGGTTTGGAGTTTACACAGGGAAGGAAGGCTGCTGATGGCGGCTGATCCGAGGCTCGAGGGAAGGTTTGATGAAGGGGAGATGAGAAGGGTACTCTTGGTTGGGCTCGCTTGCTCACACCCTGATTCTTTATCTAGACCAACAATGAGAGGTGTGGTTCAGATGCTAGGGGGTGAAACTGAAGTGCCAATTGTCCCGAGAACAAAGCCTTCTACAGGTCTCAATATTTCGCACTCTCGCCTCTTAATAAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCTCCATTTCTACTTCCACATCCGAGAACAGCTTCAATGGTGGAGATATAGTTTAA	2358	0.4283	MCDKHHPPVMLSFPWDSLFLSPLLPFLHFHSSLSLETFTPSFSVPILTTKQKHKHSIHQSTTTLTTLSSVFTTTTTTSLHSSMSLLSFFFLPLTFFFLLGLSFFNVFITASTEFDFGTLTLTSLKLLGDAHLNNATVTLTRDLTVPFSGAGQALYSRPVRFRQPGINFPASFTTFFSFSVTNLNPSSIGGGLAFVITPDDDSLGDAGGYLGLAADGFVAVEFDTLMDVEFKDINGNHVGVDLNSVVSNKVGDLDSIGIDLKSGDTVNAWIDYDGSTNEFNVWVSYSNLKPKDPILSMNLDMGQYLSDFMYVGFSGSTQGSTEIHRVEWWSFSSSFVSSGDPSSLPPPPAVSLMNTTASSARSPPPSMAPSMNHSNEERKESKKNCHNGLCKQGLGAVAGVVTAGAFVLALFAGSMIWFYSKKVKRVSRFDSLGSEIIKMPKQFSYKELKTATKCFNANRIIGHGAFGTVYKGILTENGDIIAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDAAGVGKVGVSSNLVEWVWSLHREGRLLMAADPRLEGRFDEGEMRRVLLVGLACSHPDSLSRPTMRGVVQMLGGETEVPIVPRTKPSTGLNISHSRLLISLQDSVSDCDGIISISTSTSENSFNGGDIV*	786

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g1016	785	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2	107	778	-	-
	Psa2g1016	785	Gene3D	Phosphorylase Kinase; domain 1	419	530	-	-
	Psa2g1016	785	SUPERFAMILY	Protein kinase-like (PK-like)	437	745	IPR011009	-
	Psa2g1016	785	PANTHER	-	107	778	-	-
	Psa2g1016	785	Gene3D	Transferase(Phosphotransferase) domain 1	531	735	-	-
	Psa2g1016	785	CDD	lectin_legume_LecRK_Arcelin_ConA	128	329	IPR001220	GO:0030246
	Psa2g1016	785	Gene3D	-	110	342	-	-
	Psa2g1016	785	ProSitePatterns	Legume lectins beta-chain signature.	218	224	IPR019825	-
	Psa2g1016	785	MobiDBLite	consensus disorder prediction	354	372	-	-
	Psa2g1016	785	Pfam	Legume lectin domain	112	335	IPR001220	GO:0030246
	Psa2g1016	785	Pfam	Protein kinase domain	456	657	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa2g1016	785	ProSiteProfiles	Protein kinase domain profile.	455	737	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa2g1016	785	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	574	586	IPR008271	GO:0004672\|GO:0006468
	Psa2g1016	785	CDD	STKc_IRAK	461	728	-	-
	Psa2g1016	785	SUPERFAMILY	Concanavalin A-like lectins/glucanases	111	344	IPR013320	-
	Psa2g1016	785	SMART	serkin_6	455	728	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa2g1016	785	MobiDBLite	consensus disorder prediction	354	381	-	-
	Psa2g1016	785	ProSitePatterns	Protein kinases ATP-binding region signature.	461	484	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g1016	Psa-Chr2	77413883	77419771	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa2g1016	93	767	Receptor kinase-like Gene Family	AT3G53380	69.477	0.0	924

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Psa2g1016		Pkinase	9e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g1016	-		-	gmx:100810624	1066.22