Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0991 ATGGAGCAGGAACAAGAAACCTTCGAATGCTTTCTAACATGGACATCACAGCTTGGAATATCAGACTCAACAACCACCAACCAATCTCAACACTCTCATTCCTCTTTGGGCCATTCTCTATGCGTTTCCATCTTTCCTAACTCTGGCGGTAGAGGTTTGGGTGCTGTGAGAGATCTTCGGAGGGGAGAACTTATTCTAAGAGTTCCAAAATCTGCTTTAATGACTACAGATAGTGTAATCATGGAAGATAAAAAGCTCTGCCTTGCTGTCAATAGACACTCTTCTCTTTCATCAGTTCAGATATTGACTGTTTGCTTGTTATATGAAGTCGGTAAAGGAAAGACTTCAAGGTGGCATCCTTACCTCGTGCATATACCACAAAGTTACGACTTGCTAGCCATGTTTGGCGAATTTGAGAAACAAGCACTGCAAGTGGATGAAGCTATGTGGGTAACAGAAAAAGCTATACAAAAAGCCAAATCAGAATGGAAAGAAGCTCATGCTTTAATGGAAGATCTCATGTTTAAGCCTCAGCTTTTAACATTTAAGGCTTGGGTTTGGGCTGCGTCAACGATATCTTCCCGGACGCTGCATATACCATGGGATGAAGCTGGTTGTTTATGTCCTATCGGCGACTTGTTTAATTATGATGCGCCTGGAGACGACCTATCTGGTATTGAGGACATAGTGGTAGACGAAGAGCAGATGGATTTTCATTCTCAGAGACTAACAGACGGTGGGTTTGATGAAGACGCTGATGCATATTGCCTCTATGCAAGGGCAAATTACAAGAAAGGCGATCAGGTTCTATTATGCTATGGAACATACACAAATTTGGAGCTTCTTGAACACTATGGATTTCTCTTGCAAGAAAATTCAAATGACAAAATTTTCATCCCTTTGGAACCTGCTATGTACACTTCTACTTCATGGTCTAAGGAGTCACTCTATATCCATCATAACGGGAAGCCTTCATTTGCGCTACTAGCTGCGTTACGTTTGTGGGCAACCCCTCATAATAAGCGAAGGTCTGTCGGCCATCTTGCATACTCTGGTTCCCAACTGTCTACCGCCAATGAAATTATCGTTATGAAATGGTTGTCGAAAACATGTGACGCCGTCTTAAAGAACTTGCCAACATCTATTGAAGACGACACCATACTTGTGAATGCATTGGATAGTAATCAAAACTTTTTAACATTCATGGCGATTGCAAAACTTATGTCTTCCATGGATGAAGTATATAACTTCTTAGAAGCTCATAATATATCGGATCCGCTTAGTTTTAGTGATGTACTTTTATCGAAAAGAGCGAGAAGGTCAATGGACAGGTGGAAATTAGCTGTCTTATGGAGGCTCAGGTATAAGAAAGTCCTTGTTGGTTGTATCTCTTATTGCAATGGAATATTGGATTCTTTCATGAGATAA 1428 0.4097 MEQEQETFECFLTWTSQLGISDSTTTNQSQHSHSSLGHSLCVSIFPNSGGRGLGAVRDLRRGELILRVPKSALMTTDSVIMEDKKLCLAVNRHSSLSSVQILTVCLLYEVGKGKTSRWHPYLVHIPQSYDLLAMFGEFEKQALQVDEAMWVTEKAIQKAKSEWKEAHALMEDLMFKPQLLTFKAWVWAASTISSRTLHIPWDEAGCLCPIGDLFNYDAPGDDLSGIEDIVVDEEQMDFHSQRLTDGGFDEDADAYCLYARANYKKGDQVLLCYGTYTNLELLEHYGFLLQENSNDKIFIPLEPAMYTSTSWSKESLYIHHNGKPSFALLAALRLWATPHNKRRSVGHLAYSGSQLSTANEIIVMKWLSKTCDAVLKNLPTSIEDDTILVNALDSNQNFLTFMAIAKLMSSMDEVYNFLEAHNISDPLSFSDVLLSKRARRSMDRWKLAVLWRLRYKKVLVGCISYCNGILDSFMR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0991 475 Gene3D set domain protein methyltransferase, domain 1 5 288 - -
Psa2g0991 475 SUPERFAMILY SET domain 38 293 IPR046341 -
Psa2g0991 475 Pfam SET domain 50 274 IPR001214 GO:0005515
Psa2g0991 475 Pfam Rubisco LSMT substrate-binding 322 459 IPR015353 -
Psa2g0991 475 Gene3D - 302 473 IPR036464 -
Psa2g0991 475 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 284 404 IPR036464 -
Psa2g0991 475 CDD SET_LSMT 49 288 - -
Psa2g0991 475 ProSiteProfiles SET domain profile. 38 274 IPR001214 GO:0005515
Psa2g0991 475 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 460 - -
Psa2g0991 475 PANTHER PROTEIN SET DOMAIN GROUP 40 4 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0991 Psa-Chr2 75721858 75725543 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa2g0991 SET 2.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0991 - - gmx:100787452 749.969