Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0981 ATGAAGCTTTCAACATCAGGAATGAGTCAGCAGGGAAATGAAGGAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCCTTGGTTTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTTTCTGCCACAACTAACCGAGAAATTGATGGTCAAATACCGAATTACCCGAGCTTGCCACCACAGTTGATATGCCAACTTCATAATGTTACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAGATGACGTTACAGCCGTTGACTCCGCAAGAGCAGAAAGATACGTTTCTTCCTATGGAATTGGGGATTCCAAGTAAGCAGCCTTCAAATTATTTTTGCAAGACATTGACTGCGAGTGATACCAGCACACATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTTCCTCCATTGGATTTCACACAGCAACCTCCTGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGACATATTTTTCGAGGACAGCCAAAGCGGCACCTTCTTACCACAGGCTGGAGTGTATTTGTTAGTGCCAAAAGACTTGTAGCTGGAGATTCTGTGCTTTTCATTTGGAATGAAAAAAATCAGCTTCTTTTGGGAATACGTCGTGCGAGTCGGCCGCAAACTGTTATGCCGTCGTCAGTTCTTTCCAGTGATAGTATGCACATTGGTCTTCTTGCAGCTGCAGCCCATGCTTCCGCAACTAATAGCTGTTTTACGGTGTTCTTTAATCCAAGGGCTAGTCCTTCCGAGTTTGTCATACAACTTTCAAAATATATCAAAGCTGTGTACCATACACGTGTTTCTGTTGGTATGCGTTTTAGGATGCTTTTTGAGACCGAAGAATCTAGTGTGCGCAGGTACATGGGTACTATAACTAGCATAAGTGACATGGATCCTGTTCGGTGGCCGAATTCTCATTGGAGGTCTGTCAAGGTCGGCTGGGATGAATCAACAGCTGGAGAGAGACAGCCTCGAGTCTCATTATGGGAAATTGAGCCTTTAACTACATTTCCAATGTATCCATCGCTATTTCCCCTTAGATTGAAACGACCATGGCATCCCGGCACTTCTTCTTTTCTTGATGGCAGAGACGAAGCAACAAATGGACTAATGTGGCTGCGAGGTGGTCCCGGAGACCATGGTCTTAATTCCATGAATTTTCAAGGTGCTGGTTTGATGCCCTGGATGCAGCAAAGACTCGATCCCGCTTTACTTGGAAATGATCATAATCAGCAATATCAAGCCATGTTAGCTGCTGGTGGTGGTTTGCAGAATCAAGGCAATGCTACTGATCTGTTAAGGCAACAAATGATGAGTTTTCAACAACCTTTCAATTATCTTCAACAATCAGGAAACCTCAGTCCTTTGCAACTTCAGCAACAGCAAACAATTCAACAATTCGCATCGACAAATAATATCATGCAACCACAAAGCCAAGTATTGGCAGAGAACCTGTCTCAGCACATCCTTCAGAAACCACACAACAATCGAGAAAACCAGACACAGCAACCGCAACAGCAACAAACTTATCAAGATACACTTTTAATTCAAGGTGATCCACTTCATCAGAAGCAACACGCTAGTTTGCCTTCACCGTCATATTCGAAACCGGATTTCTTAGATTCAGGCATGAAGTTTGCTGCTTCGGTTTCGCCGGGTCAAAACATGCTTGGTTCACTTTGTTCTGAAGGGAGTGGCAATCTCTTGAATTTATCAAGTGGTCATTCTGTGCTGACTGAACAGTTACCTCAACAAACATGGGCCTCAAAGTATTCGCCTTCGCAGGTCGATGGCATTGGTAACTCAATGTCGCACGTGCAGTATTCTGGAAGAGATACAGCACTCGCACCACCACATTGCAACTCAGATGCCCAAAATTCTGTTCTGTTTGGGGTCAATATCGATTCGTCTGGTCTTCTGCTCCCTACCACTGTTCCTCGTTATACTTCTGCGTCAGCTGATGCCGATACATCGACAATGCCATTAGGAGAGTCTGGTTTCCAGGGTTCTCCATATCATTGCATGCAGGATTCATCAGAGCTGTTGCAAAGCGTGGGGCAAATTGATGCTCAAAACCAGATGCCGACATTTGTGAAGGTATACAAATCAGGTTCAGTAGGGCGCTCCCTTGACATTTCGCGGTTCAGCAGCTATCACGAACTGCGGGAGGAGTTGGCTCAGATGTTTGGAATCGAGGGGAAATTTGAAGATCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTCAATAATGTTTGGTACATCAAAATACTTTCTCCTGAAGATATTCAGAAAATGGGAGAACAAGCCATAGAATCCCTTGGTCCAAGTTCTGGACAAGGACAAAGGCTGAATAACACTGGTGCAGAATCTCATGACATTGTTTCTGGACTACCATCATTAGGCTCACTTGAATACTGA 2550 0.449 MKLSTSGMSQQGNEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFNPRASPSEFVIQLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLDGRDEATNGLMWLRGGPGDHGLNSMNFQGAGLMPWMQQRLDPALLGNDHNQQYQAMLAAGGGLQNQGNATDLLRQQMMSFQQPFNYLQQSGNLSPLQLQQQQTIQQFASTNNIMQPQSQVLAENLSQHILQKPHNNRENQTQQPQQQQTYQDTLLIQGDPLHQKQHASLPSPSYSKPDFLDSGMKFAASVSPGQNMLGSLCSEGSGNLLNLSSGHSVLTEQLPQQTWASKYSPSQVDGIGNSMSHVQYSGRDTALAPPHCNSDAQNSVLFGVNIDSSGLLLPTTVPRYTSASADADTSTMPLGESGFQGSPYHCMQDSSELLQSVGQIDAQNQMPTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAIESLGPSSGQGQRLNNTGAESHDIVSGLPSLGSLEY* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0981 849 SMART B3_2 128 230 IPR003340 GO:0003677
Psa2g0981 849 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Psa2g0981 849 Gene3D - 126 229 IPR015300 -
Psa2g0981 849 ProSiteProfiles PB1 domain profile. 721 805 IPR000270 GO:0005515
Psa2g0981 849 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 826 IPR044835 GO:0003677|GO:0006355|GO:0009725
Psa2g0981 849 Pfam AUX/IAA family 716 805 IPR033389 -
Psa2g0981 849 PANTHER AUXIN RESPONSE FACTOR 1 826 - -
Psa2g0981 849 CDD B3_DNA 127 228 IPR003340 GO:0003677
Psa2g0981 849 Gene3D - 716 810 - -
Psa2g0981 849 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Psa2g0981 849 SUPERFAMILY CAD & PB1 domains 721 795 - -
Psa2g0981 849 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Psa2g0981 849 Gene3D - 292 364 - -
Psa2g0981 849 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0981 Psa-Chr2 74980715 74988726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0981 98 818 B3 DNA Binding Superfamily AT5G37020 68.263 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Psa2g0981 AUX_IAA 1.4e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0981 - - gmx:100780393 1437.94