Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0962 ATGACAATTGGATTCATGGAGGTTCATCTTCTCAAAGCAAAGGGTCTCCAAGAATCTGATATCTTTGCTCGCATGGATCCGTATGTCGTGTTACAATACAAAAATCAAGAGAAAAAGAGCAACGTAGTTCATGAGGGAGGTAGCAATCTTGAATGGAATGAGAAATTTGTATTCAGAGTAGAATACCCCGGATCAGGTGACCAATACAAGCTCAACCTTAAAATCATGGACAGAGATGTTTTTACTGCCGATGATTTTGTCGGCCAGGCCATAATCTATGTAAAAGATTTATTAGCGGAAGGAGTTGAGAAAGGATCGGCTATACTTCGTCCTCGCAAGTATAGTGTGGTTCGAGCGGACAATTCTTATTGCGGTGAGATTGAAGTTGGTATAAATTTCACTAGAAAGGAAGAGGATAATACTGACGGCGAATATGGAGGATGGAAGGATAGTGAGTATTAG 462 0.4048 MTIGFMEVHLLKAKGLQESDIFARMDPYVVLQYKNQEKKSNVVHEGGSNLEWNEKFVFRVEYPGSGDQYKLNLKIMDRDVFTADDFVGQAIIYVKDLLAEGVEKGSAILRPRKYSVVRADNSYCGEIEVGINFTRKEEDNTDGEYGGWKDSEY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0962 153 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 152 - -
Psa2g0962 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 135 IPR035892 -
Psa2g0962 153 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Psa2g0962 153 Pfam C2 domain 6 103 IPR000008 -
Psa2g0962 153 PANTHER C2 DOMAIN-CONTAINING 1 152 - -
Psa2g0962 153 SMART C2_3c 5 106 IPR000008 -
Psa2g0962 153 Gene3D C2 domain 3 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0962 Psa-Chr2 68903055 68904538 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0962 3 105 C2H2 Transcription Factor Family AT4G21160 32.381 1.45e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0962 - - gmx:100500493 250.751