Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g0931 | ATGACAGGGTTTGGCTCATCATGTGGCGCATGCAAGTTCCTAAGAAGAAAGTGTGCTAGTGATTGTGTTTTTGCTCCTTACTTCTCTTATGAACAAGCTTCAACCCATTTTTCAGCTGTGCATAAGGTTTATGGTGCTAGTAATGTTTCTAAACTATTGTCACATCTTCCTCTTCAGAATAGAAGTGATGCTGCTATTACTATATCTTATGAAGCCTTGGCTCGCATGCAAGATCCTATTTATGGTTGTGTTGCTCATATCTATGCATTGCAACATCAGGTTGCAAGTTTACAAGAGGAGATAGATATTCTTGGAAGTCTAATGGAAACTTCTACTTTTAGTATTGTGGATCATGGCAATGTCCAAGCTCCAATGAACTCAAACAATGGAACACAATATTACCCTAATCAATTGGCTAATTATCTTTCACAAGAAGAAGGTTTCACATCATGTCAAAATTTTGAATCATACATGAATATTGATATGGATATTCCTAGTGCACATGGAATGGTTGAGCCTTTATATGGTGATTCCAACTCCAATCCATTAGAGAGGTTTCTATCAGGAATTGATCAAGAGGGTTTCCTGAACCACCCCTGGTTCAAGCATAATGCAGACATGTAG | 624 | 0.3798 | MTGFGSSCGACKFLRRKCASDCVFAPYFSYEQASTHFSAVHKVYGASNVSKLLSHLPLQNRSDAAITISYEALARMQDPIYGCVAHIYALQHQVASLQEEIDILGSLMETSTFSIVDHGNVQAPMNSNNGTQYYPNQLANYLSQEEGFTSCQNFESYMNIDMDIPSAHGMVEPLYGDSNSNPLERFLSGIDQEGFLNHPWFKHNADM* | 208 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g0931 | 207 | ProSiteProfiles | LOB domain profile. | 6 | 108 | IPR004883 | - | |
Psa2g0931 | 207 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 205 | - | - | |
Psa2g0931 | 207 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 33 | 1 | 205 | - | - | |
Psa2g0931 | 207 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 103 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g0931 | Psa-Chr2 | 65928683 | 65929988 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g0931 | 1 | 114 | AS2 family | AT5G06080 | 71.930 | 2.44e-57 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Psa2g0931 | LOB | 1.2e-35 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g0931 | K13945 | - | gmx:100787638 | 297.36 |