Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0931 ATGACAGGGTTTGGCTCATCATGTGGCGCATGCAAGTTCCTAAGAAGAAAGTGTGCTAGTGATTGTGTTTTTGCTCCTTACTTCTCTTATGAACAAGCTTCAACCCATTTTTCAGCTGTGCATAAGGTTTATGGTGCTAGTAATGTTTCTAAACTATTGTCACATCTTCCTCTTCAGAATAGAAGTGATGCTGCTATTACTATATCTTATGAAGCCTTGGCTCGCATGCAAGATCCTATTTATGGTTGTGTTGCTCATATCTATGCATTGCAACATCAGGTTGCAAGTTTACAAGAGGAGATAGATATTCTTGGAAGTCTAATGGAAACTTCTACTTTTAGTATTGTGGATCATGGCAATGTCCAAGCTCCAATGAACTCAAACAATGGAACACAATATTACCCTAATCAATTGGCTAATTATCTTTCACAAGAAGAAGGTTTCACATCATGTCAAAATTTTGAATCATACATGAATATTGATATGGATATTCCTAGTGCACATGGAATGGTTGAGCCTTTATATGGTGATTCCAACTCCAATCCATTAGAGAGGTTTCTATCAGGAATTGATCAAGAGGGTTTCCTGAACCACCCCTGGTTCAAGCATAATGCAGACATGTAG 624 0.3798 MTGFGSSCGACKFLRRKCASDCVFAPYFSYEQASTHFSAVHKVYGASNVSKLLSHLPLQNRSDAAITISYEALARMQDPIYGCVAHIYALQHQVASLQEEIDILGSLMETSTFSIVDHGNVQAPMNSNNGTQYYPNQLANYLSQEEGFTSCQNFESYMNIDMDIPSAHGMVEPLYGDSNSNPLERFLSGIDQEGFLNHPWFKHNADM* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0931 207 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Psa2g0931 207 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 205 - -
Psa2g0931 207 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 205 - -
Psa2g0931 207 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0931 Psa-Chr2 65928683 65929988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0931 1 114 AS2 family AT5G06080 71.930 2.44e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa2g0931 LOB 1.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0931 K13945 - gmx:100787638 297.36