Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0916 ATGGCGAATCGGTGGTGGGATGGAAGAACCACGGAGGCAAACCCGAACCCGGTTGAAGGAGAGAACCAAACCGGTTCGAACCGGGTCGTGTTACGAAGAGAGCAAGAGTTCATGGAAAGCAACACCAACAACAGTAACAGTAACGTTACTCCAACGATGAGTAACAACAGCACCGTCAACGTTAACGGCGAAGACGAAAACAACAATGACCGTGACGGCGACGACCAGAACACCGGAAGCGGACGCCGTCCACGCGGCCGACCTCCAGGTTCGAAGAACAAACCGAAACCGCCGGTGGTGATAACGAAAGAAACACCAAACGCTCTTCGTAGCCACATCTTGGAAATCGCCAGTGGAAGCGATGTTGCTGAGAGTATTTCCACTTTTGCCAACCGTCGTCACCGCGGTGTTTCGGTTCTCAGCGGCACCGGCGTTGTTACCAATGTGACTCTCCGGCAACCGACAGCTCCGGGAGGTATCATTGCTCTTCAGGGGAGGTTTGACATTCTGTCACTCTCCGGAGCTTTTTTGCCTCCGCCGTCTCCACCGGAGGCGACCGGGCTGACGGTCTATCTCGCGGGAGTGCAAGGGCAGGTTGTGGGAGGATTGGTGGTCGGAGCGCTGGTTGCGTCAGGACCAGTGATGGTTGTTGCTGCTACTTTTGCTAATGCTACTTATGAGAGGCTACCATTGGAAGATGACCAAGGAGAAGAGGAAAACATGGGACAAGAGGTTAATAATACTCGCAATATTATTAACAACAATGATGGTGGTGGTGCTTCTGGTTCTTTGTCTGTTACTGGTTCTGCAAGTGGAAGTGGTGCAACAACATCTCATGGATTAGGCGAATTCAATATGAATCCGAATTTGATGAATGGTGGTGGACACAATGTGGGACACGGACACGGACATGATATGTTCTGGCGTCCGCCTCCACCACCTTATTAA 948 0.519 MANRWWDGRTTEANPNPVEGENQTGSNRVVLRREQEFMESNTNNSNSNVTPTMSNNSTVNVNGEDENNNDRDGDDQNTGSGRRPRGRPPGSKNKPKPPVVITKETPNALRSHILEIASGSDVAESISTFANRRHRGVSVLSGTGVVTNVTLRQPTAPGGIIALQGRFDILSLSGAFLPPPSPPEATGLTVYLAGVQGQVVGGLVVGALVASGPVMVVAATFANATYERLPLEDDQGEEENMGQEVNNTRNIINNNDGGGASGSLSVTGSASGSGATTSHGLGEFNMNPNLMNGGGHNVGHGHGHDMFWRPPPPPY* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0916 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 314 IPR014476 GO:0003680
Psa2g0916 315 PIRSF ESCAROLA 21 315 IPR014476 GO:0003680
Psa2g0916 315 MobiDBLite consensus disorder prediction 1 101 - -
Psa2g0916 315 Gene3D - 109 240 - -
Psa2g0916 315 ProSiteProfiles PPC domain profile profile. 106 242 IPR005175 -
Psa2g0916 315 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 234 - -
Psa2g0916 315 MobiDBLite consensus disorder prediction 15 64 - -
Psa2g0916 315 CDD DUF296 110 192 IPR005175 -
Psa2g0916 315 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 222 IPR005175 -
Psa2g0916 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 40 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0916 Psa-Chr2 64700339 64702599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0916 82 315 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 57.872 2.31e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0916 - - cam:101507777 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0916 2 64700339 64702599 Psa2g0916 2 64700339 64702599 ECH
Psa5g2881 5 219230018 219233575 Psa2g0916 2 64700339 64702599 PCT