Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0900 ATGAAGGCATTGATTCTGGTTGGAGGGTTTGGAACTAGGTTGAGGCCATTGACACTCAGTGTCCCTAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATTTTGCATCAGATAGAGGCTCTTAAGGCCACTGGAGTTACTGAAGTGGTACTGGCCATCAATTACCAACCAGAGGTTATGTTGAATTTCTTGAAGGATTTTGAAGCAAAGCTAGGCATTAAGATTAGTTGTTCACAAGAAACTGAACCACTAGGAACTGCAGGTCCCCTGGCTCTTGCTAGGGATAAGCTGATAGATGAATCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAATCCCATGGAGGGGAGGCTTCCATAATGGTTACAAAGGTTGACGAGCCATCAAAATATGGTGTTGTTGTAACAGAGGAGACCACGGGACAGGTTGAGAAATTTGTTGAAAAACCAAAGTTGTTTGTTGGTAACAAAATCAATGCTGGAATTTACCTATTGAACCCATCTGTTTTGGATCGAATTGAACTGAGGCCCACCTCTATTGAAAAAGAAATTTTTCCAAAGATTGCTGCAGAGAAAAAGCTATATGCAATGGTCCTTCCTGGATTCTGGATGGACATCGGACAACCGAGGGACTATATTACTGGCTTGAGGCTTTACCTGGACTCATTGAGGAAGAAGTCTTCTTCTAAGCTGGCCATTGGCTCTAACATTGTGGGGAATGTCATTGTTGATGAAACAGCCAAAATTGGCGAGGGATGTCTCATTGGACCTGATGTCGCCATCGGTCCCGGCTGCATTGTTGAGTCTGGTGTGAGGCTCTCACGCTGCACAGTAATGCGAGGAGTCCGGATTAAGAAACATGCTTGCATTTCCAGCAGTATCATTGGGTGGCATTCCACCGTTGGTCAATGGGCTCGAGTGGAGAATATGACTATCCTTGGAGAAGATGTTCATGTTTGTGATGAGATTTACAGCAATGGAGGTGTTGTTTTGCCCCACAAGGAGATTAAGACAAATATTCTGAAACCCGAAATTGTCATGTGA 1086 0.4346 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKATGVTEVVLAINYQPEVMLNFLKDFEAKLGIKISCSQETEPLGTAGPLALARDKLIDESGEPFFVLNSDVISEYPLKEMIEFHKSHGGEASIMVTKVDEPSKYGVVVTEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPKIAAEKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSSKLAIGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0900 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Psa2g0900 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Psa2g0900 361 Gene3D Hexapeptide repeat proteins 236 357 - -
Psa2g0900 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Psa2g0900 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Psa2g0900 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
Psa2g0900 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Psa2g0900 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0900 Psa-Chr2 58462274 58465856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0900 1 185 Eukaryotic Initiation Factors Gene Family AT4G18300 22.280 7.26e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0900 K00966 - csin:114292478 675.241