Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa2g0896 | ATGGCTGGGCTCGAAGGAGTGGTGTCTGTTTTACTTAATCAAAAGAGGCACATCCTTACCACCAAGTCATGGGACTTTATTGGTCTAACACAATATGCTGAAAGAGAAAATAATGAAAGTGATATTATTGTGGGGGTTATTGTTACTGGAATTTGGCCGGAATCTTCTAGTTTCAATGATGAAGGTTTCCATCCTCTACCGACCAAATGGAATGGCAGTTGTATTGCTTCAAATTTTTTTTGCAATAGAAAAATCATTGGAGCCAAGTATTATTTATCTAGTTCTAATGAACCCTTGAGCCAAGTAGATTTTGAATCTCCAAGAGATTCAAAGGGACATGGAACTCATACATCATCAACCGCAGCGGGGAACCCAGTTATCATGGCAAGCATGCTAGTACTTGCACAAGGAACGACAAGAGGTGCAGTCCCGTCTGCACGCATTGCTGTATACAAAGTATGCTGGTCAACTGGGTGCTTTGATGAAAGTATTCTTGCCGCATTTGATGATGCAATTCTTGATGGGGTTGATATATTATCAGTATCACTTGGATCTGATTCAGCAGACAACAGTAATCATTATAAGGATGCAATTTCTATTGAAGCATTCCATGCAATGCGTGATGGAGTGCTTACAGTAGTGGCAGGAGGGAACTTAGGTCCACACCCTGCATCCTTACATAATCTTGCACCATGGACAGTTGTTATTGGTGCAAGCACGATAGATAGAAAATTTATCACCAAGGTCAAATTAGGAGATAATACAACATATGAGAACTTGAAGGAGTTGTGTGTCTTCTTGCCGATACAAAGAGATACTCTCTCGTTACTCGAGATGATGAGATTTCGTTGGCTTGGAAAGAGAATTTAA | 870 | 0.4034 | MAGLEGVVSVLLNQKRHILTTKSWDFIGLTQYAERENNESDIIVGVIVTGIWPESSSFNDEGFHPLPTKWNGSCIASNFFCNRKIIGAKYYLSSSNEPLSQVDFESPRDSKGHGTHTSSTAAGNPVIMASMLVLAQGTTRGAVPSARIAVYKVCWSTGCFDESILAAFDDAILDGVDILSVSLGSDSADNSNHYKDAISIEAFHAMRDGVLTVVAGGNLGPHPASLHNLAPWTVVIGASTIDRKFITKVKLGDNTTYENLKELCVFLPIQRDTLSLLEMMRFRWLGKRI* | 290 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa2g0896 | 289 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 23 | 289 | - | - | |
| Psa2g0896 | 289 | SUPERFAMILY | Subtilisin-like | 19 | 255 | IPR036852 | GO:0004252|GO:0006508 | |
| Psa2g0896 | 289 | Gene3D | - | 242 | 259 | - | - | |
| Psa2g0896 | 289 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 3 | 256 | IPR045051 | - | |
| Psa2g0896 | 289 | Pfam | Subtilase family | 40 | 242 | IPR000209 | GO:0006508|GO:0008236 | |
| Psa2g0896 | 289 | Gene3D | Peptidase S8/S53 domain | 41 | 241 | IPR036852 | GO:0004252|GO:0006508 | |
| Psa2g0896 | 289 | PANTHER | CUCUMISIN-LIKE | 3 | 256 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa2g0896 | Psa-Chr2 | 58095044 | 58097151 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa2g0896 | 5 | 256 | Subtilisin-like Serine Gene Family | AT5G03620 | 52.734 | 5.19e-81 | 253 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa2g0896 | - | - | cam:101506276 | 362.073 |