Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0893 ATGGCTGGACTTGATGGGGTGGTGTCTGTATTTCCAAATGAAAAGAGACAACTCCTTACAACAAGATCTTGGGATTTTATAGGATTTCCAGAATATGTCGAGAGGGAATACAATGAATGTGATGTCATAATTGGAGTGATAGATTCTGGAATTTGGCCGGAATCAGAAAGTTTCAATGATAAAGGATATGGTCCACCACCAAGCAAATGGAAAGGCATTTGCCAATCTTCTGATCTTACATGCAACAACAAAATAATTGGTGCCAGATATTATAGAAATGATTATGGAGAAGACTTCTTGAAAAATAATATCTTATCCCCAAGAGACACAACTGGGCATGGGACCCATACAGCATCAACAGCGGCTGGAAACCCTGTTAGCATGACAAGTATGTTAGGCCTTGGCCATGGAACAACAAGAGGAGGGGCTTCCTCAGCAAGAATTGCGGTTTATAAAGTATGTTGGTCTGATTCATGTCAGGATGTGGACATTCTTGCCGCATTTGACGATGCTGTTATTGATGGAGTTGACATATTATCCGTCTCTATTGGAGGGTCAGATGCTAGTATCCATTTTATGGATGCAATCTCAGTTGGATCATTCCATGCAATGAAAAAGGGAATACTAACTGTGTCTGCGGCAGGGAACTTGGGTCCAAAAAGTTCATCCCTAACAAATTTTTCACCTTGGGCAATTAGTGTTGCTGCAAGCACCATGGATAGAAAATTTGTTACAAAGGTCAAATTAGGAGATAACAAAATTTATGAGGGTACTTCTTTGAATACATTTGACCTTCAGGGAGAACTGTGGCCTATTATCTATGCTGGTGATGCACCAAATAAGGAAGCAGGCTTTGATAAAGATTCATCCAGGAATTGCTCAGCCAATTCGTTGGATATCAAGTTGGTGAAGGGTAAAATTCTTCTATGTGAAGATAGAATTGGACCTTCTGAAGCCTATAGAGTTGGTGCTGTGGGTGTCTTGGTACAAGGTCAAAAATCTATGGATACCGCATGTTCTTATCCCTTGCCTGGATGTCACCTTCATTCGAAGGATGCCGCCAAAGTACATAAATATATACACTCTACCAGGAATCCGGTAGCAACTATATTTAAAACGTACGAGGCAAATGATACTTTGGCACCTATGGCTGCCTCTTTCTCGTCAAGGGGTCCTAATAATGCTACACCTGAGATTCTAAAGCCTGATTTAACTGCTCCAGGAGTAGACATCTTAGCCAGTTGGTCTCCAATTGCTCTAATTTCTGATATTCACGGTGAGAAAAGAAAATTGGAGTTCAATATTGTGTCTGGAACATCAATGTCGTGTCCCCACGTTTCTGGTGCAGCAGCATATATAAAATCCTTTCATCCTACATGGTCACCTGCTGCTGTACGCTCAGCTTTGATGACGACAGCCAAACAAATGAGTCCAGACAAGAACCCTGACGCAGAATTTGCGTATGGAGCTGGACAAATTGACCCTATAAAGGCTATGAATCCTGGTTTAGTATATGATGCAAATGAAGAAGACTATATTAGGTTTTTATGTGGTCAAGGTTTAAATATGTCTATTTTACTCCAAATCACAGAGAGGATAATCAATTGCTCTGAGATAGGATATTTGACCGCAAGAGACTTAAATTATCCTTCCTTTGCTTTCAAAGCTCCACGATCTAAACATCACTTGAACGGAAGCTTCAAAAGGGCGGTTACAAATGTAGGATTGCCTATGTCTACGTATAGAGCATTTGTAACAGCACCCAAAGGACTCAATATTTCAGTGATCCCCAATGTGTTATCATTCACATCCTTGGGAGAGAAACAAACATTTACTCTCACTGTAAATGGAAAAATGAAGAAATCAATTGGCTCAGCTTCTTTGATATGGGACGATGGTAAATATCAAGTGAGGAGTCCCATTGTTGTATTTGACGAGCGAGCCGTGAACGGAAAGGGTGCCAATTTATATAGGATATATTGCATATGCATTGTAATATTTAATTTACTACTTTATATTATTATTATTGGATAA 2034 0.3987 MAGLDGVVSVFPNEKRQLLTTRSWDFIGFPEYVEREYNECDVIIGVIDSGIWPESESFNDKGYGPPPSKWKGICQSSDLTCNNKIIGARYYRNDYGEDFLKNNILSPRDTTGHGTHTASTAAGNPVSMTSMLGLGHGTTRGGASSARIAVYKVCWSDSCQDVDILAAFDDAVIDGVDILSVSIGGSDASIHFMDAISVGSFHAMKKGILTVSAAGNLGPKSSSLTNFSPWAISVAASTMDRKFVTKVKLGDNKIYEGTSLNTFDLQGELWPIIYAGDAPNKEAGFDKDSSRNCSANSLDIKLVKGKILLCEDRIGPSEAYRVGAVGVLVQGQKSMDTACSYPLPGCHLHSKDAAKVHKYIHSTRNPVATIFKTYEANDTLAPMAASFSSRGPNNATPEILKPDLTAPGVDILASWSPIALISDIHGEKRKLEFNIVSGTSMSCPHVSGAAAYIKSFHPTWSPAAVRSALMTTAKQMSPDKNPDAEFAYGAGQIDPIKAMNPGLVYDANEEDYIRFLCGQGLNMSILLQITERIINCSEIGYLTARDLNYPSFAFKAPRSKHHLNGSFKRAVTNVGLPMSTYRAFVTAPKGLNISVIPNVLSFTSLGEKQTFTLTVNGKMKKSIGSASLIWDDGKYQVRSPIVVFDERAVNGKGANLYRIYCICIVIFNLLLYIIIIG* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0893 677 Gene3D - 516 645 - -
Psa2g0893 677 Gene3D Peptidase S8/S53 domain 41 512 IPR036852 GO:0004252|GO:0006508
Psa2g0893 677 Pfam Fibronectin type-III domain 546 643 IPR041469 -
Psa2g0893 677 ProSitePatterns Serine proteases, subtilase family, serine active site. 438 448 IPR023828 -
Psa2g0893 677 PANTHER PUTATIVE-RELATED 3 645 - -
Psa2g0893 677 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 645 IPR045051 -
Psa2g0893 677 CDD Peptidases_S8_3 17 473 IPR034197 -
Psa2g0893 677 PRINTS Subtilisin serine protease family (S8) signature 39 58 IPR015500 -
Psa2g0893 677 PRINTS Subtilisin serine protease family (S8) signature 109 122 IPR015500 -
Psa2g0893 677 PRINTS Subtilisin serine protease family (S8) signature 437 453 IPR015500 -
Psa2g0893 677 Pfam Subtilase family 41 491 IPR000209 GO:0006508|GO:0008236
Psa2g0893 677 ProSiteProfiles Serine proteases, subtilase domain profile. 23 499 - -
Psa2g0893 677 CDD PA_subtilisin_like 247 370 - -
Psa2g0893 677 Gene3D - 240 377 - -
Psa2g0893 677 SUPERFAMILY Subtilisin-like 18 503 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0893 Psa-Chr2 57883620 57889385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0893 1 644 Subtilisin-like Serine Gene Family AT5G59190 49.160 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0893 - - cam:101506276 935.636