Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0869 ATGGTCTCTCTAAGGCCATTCTTTCTTTTTCTTCTCATCTGCTTTCAAATTCATCAAGCATGTTCCAATGATCGCAAGACTTACATTGTCTACATGGGTGATCATCCAAAGGGCATTGATCCAGCCACTTTACCTTCTCTTCACACCACAATGGCTCAAAATGTCCTTGGCAGTGATTTTGAACCGGGAGCTATACTTCACAGCTACAAGAAGAGTTTTAATGGATTCGTAGTGAAATTGACAGAAGATGAAGCAGAAACTTTGGCCGGTAAATCGAAGAGCTTCAGTGATGAAGGATTCGGTCCACCACCAAAAAAATGGAAGGGATCATGCCACAACTTCACTTGCAACAACAAAATAATTGGTGCACGATACTTTAATATCGAAGGTTCGTATAGCAAAAAAGACATCAAAGATCCAACAGATGTAAATGGTCATGGGACACATTGTTCGTCCACGGTCGCTGGAAACGTGGTTAATTCTGTGAGCCTACAAGGCTATGCCTCAGGAACGGCGCGCGGAGGAGTTCCCTCAGCACGCATTGCTATGTACAAAGTATGCTGGGAAACCGGCTGTGATCAAGCTGGTATCCTTGCAGCATTTGATGAAGCAATTCATGACGGAGTTGATGTTATATCAGTTTCTCTTGGATCAACTCAAGTAGTAGTAGTTCCATATTTTCGAAATGGCATCGACATTGGAAGTTTCCATGCAATGAAAAGAGGCATATTTACGTCGAATTCCGCTAATAATCTCGGCCCAAATATTCTCACCATGACAAATTTTGCACCTTGGTTACTTTCTGTTGCTGCAAGCACTTTTGGTAGAAAGTTTGTTACAAAGGTGCAATTGGGAAATGGTGCCATTTATGAGGGAGCCACAATTAACACATTTGATCTCAAAAGAAAAATGTTTCCTATCATTTTCGCAAGAGATATTCCAAATACTGCTGGTGGATTCAACAGTTCTCAATCCAGATTATGCTCCAAAGACTCCGTAGATAAACAAGCCGTAAAGGGAAAGATAGTCTTATGCGAGGGATTTGTGTCTGCTTCAGATGTAGGGTTTTTCTCAGGAGCAGTTGGTATAATATTTGGAGATACTTATCCACAAGATTCGCCATTTATATTTGCATTGCCAACAACATTGTTGAGTCTGTGGAATTTTAGAGAAATACAATACTACATGAAATCAACAAGAAATCCAACTGCCACAATATTTAAGAGTGAAGAAGTCGAAGATTCGTTGTCCCCTTATATAGCTTCGTTTTCATCAAGAGGTCCAAACCCAATTACACTAAATACTCTCAAGGTAACATAA 1320 0.403 MVSLRPFFLFLLICFQIHQACSNDRKTYIVYMGDHPKGIDPATLPSLHTTMAQNVLGSDFEPGAILHSYKKSFNGFVVKLTEDEAETLAGKSKSFSDEGFGPPPKKWKGSCHNFTCNNKIIGARYFNIEGSYSKKDIKDPTDVNGHGTHCSSTVAGNVVNSVSLQGYASGTARGGVPSARIAMYKVCWETGCDQAGILAAFDEAIHDGVDVISVSLGSTQVVVVPYFRNGIDIGSFHAMKRGIFTSNSANNLGPNILTMTNFAPWLLSVAASTFGRKFVTKVQLGNGAIYEGATINTFDLKRKMFPIIFARDIPNTAGGFNSSQSRLCSKDSVDKQAVKGKIVLCEGFVSASDVGFFSGAVGIIFGDTYPQDSPFIFALPTTLLSLWNFREIQYYMKSTRNPTATIFKSEEVEDSLSPYIASFSSRGPNPITLNTLKVT* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0869 439 CDD PA_subtilisin_like 282 406 - -
Psa2g0869 439 ProSiteProfiles Serine proteases, subtilase domain profile. 1 439 - -
Psa2g0869 439 PANTHER PUTATIVE-RELATED 17 89 - -
Psa2g0869 439 PANTHER PUTATIVE-RELATED 91 437 - -
Psa2g0869 439 SUPERFAMILY Subtilisin-like 112 430 IPR036852 GO:0004252|GO:0006508
Psa2g0869 439 Gene3D Peptidase S8/S53 domain 93 437 IPR036852 GO:0004252|GO:0006508
Psa2g0869 439 Pfam Subtilase family 125 430 IPR000209 GO:0006508|GO:0008236
Psa2g0869 439 ProSitePatterns Serine proteases, subtilase family, histidine active site. 146 156 IPR022398 -
Psa2g0869 439 Gene3D - 275 413 - -
Psa2g0869 439 Pfam Peptidase inhibitor I9 27 89 IPR010259 -
Psa2g0869 439 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 92 IPR037045 -
Psa2g0869 439 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 91 437 IPR045051 -
Psa2g0869 439 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 89 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0869 Psa-Chr2 55831838 55834139 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0869 24 437 Subtilisin-like Serine Gene Family AT5G59100 40.169 2.84e-106 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0869 - - gmx:100815516 589.341