Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0868 ATGACTCTTTCTTTTGCTGTTGTTGCTACTATTGAGGTAAATGCTTTATTTCAGGGAATTGAGTTATCTTCATCTATCACTCGGGCAAAGTTTGAGATGATCAACATAGACCCCTTTGAAAAATGTATGGAGATCGTTGAGAGCTCCTTTGTGGATTCTGGAATGGACAAAAGTAGTGTAGATGATGTGGTCCTTATTGGTGGCTCGTCCCGAATCCCCAAACTGCAACAACTATTGCAAGACTTTTTTAATGGGAAGGATTTGTGTATGAGCATCAACCCTGATGAAGCAGTGGCTTATGGTGCAGCTGTCCATTTTGGTCCAGACTTGGTTCAATGTGTTAATGTTTGCAGGTTTATGAAAATGGATTTGATGTGCTTGAACTCTGACTTGTTAAGTGCGCATGATGATTGTAGCCTTATTGTAGCAGGTCAATATGTGAAATGGTTTGTGATTATGATGTTACGCATTGCAGACCGGCACCAGCATACAACTAGTGGGTAA 504 0.4067 MTLSFAVVATIEVNALFQGIELSSSITRAKFEMINIDPFEKCMEIVESSFVDSGMDKSSVDDVVLIGGSSRIPKLQQLLQDFFNGKDLCMSINPDEAVAYGAAVHFGPDLVQCVNVCRFMKMDLMCLNSDLLSAHDDCSLIVAGQYVKWFVIMMLRIADRHQHTTSG* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0868 167 Gene3D - 42 89 - -
Psa2g0868 167 PANTHER HEAT SHOCK PROTEIN 70KDA 2 127 IPR013126 GO:0005524|GO:0140662
Psa2g0868 167 Gene3D Actin; Chain A, domain 4 2 41 - -
Psa2g0868 167 Pfam Hsp70 protein 7 105 IPR013126 GO:0005524|GO:0140662
Psa2g0868 167 Gene3D - 90 105 - -
Psa2g0868 167 PANTHER HEAT SHOCK 70 KDA PROTEIN 2 127 - -
Psa2g0868 167 SUPERFAMILY Actin-like ATPase domain 2 104 IPR043129 -
Psa2g0868 167 ProSitePatterns Heat shock hsp70 proteins family signature 3. 63 77 IPR018181 -
Psa2g0868 167 PRINTS 70kDa heat shock protein signature 60 76 - -
Psa2g0868 167 PRINTS 70kDa heat shock protein signature 92 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0868 Psa-Chr2 55728591 55729778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0868 2 105 Calmodulin-binding Proteins AT5G02500 66.346 7.00e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0868 K03283 - lja:Lj0g3v0098949.1 151.754