Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0837 ATGTCTGACGCTTTGATCAATGGATTGGCTGGCGCTGGAGGAGGGATCATTGCTCAACTTATCACATACCCTCTTCAGACTGTTAACACTCGTCAACAAACCGATCGCGATCCGAAGAAGAATAATAAGAGTCTTGGGACTTTCCAGCAAATGTGTCAGGTTGTGAAACATGAGGGGTGGGAGCGATTGTATGGAGGTTTGACTCCATCACTTGTGGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACCGAGCTGAAGCAGCTGCATTAGAGAAGAAAATGCTAGGCAATGGTGATGGTTCAGTTGGAATGTTCTCCTCACTTATTGTTGCAGCTTTATCTGGTTGTGTTAACGTGCTGCTGACAAATCCGATATGGCTAGTTGTTACCCGCATGCAGACACATAAAAAAGAGTCGAAGAGAACTATCCCGGATCCGCGGCTGTCTGACGCCACTGAACAAAAACCGCTTTCTGCTGTTGAGCCTCATGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTACGATGAATCCGGAGTTTTAGGTTTCTGGAAGGGTGTATTACCAACATTGGTCATGGTTAGCAATCCTTCCATACAGTTCATGCTGTACGAAACCTTGTTGGCGAAGTTGAAAAAAAGAAGCGCTAGCAACACCGTATCTGCTCTACAGATATTTCTTCTTGGAGCCATTGCTAAGCTCGGAGCTACCGTTGTAACCTATCCTCTTCTTGTTGTGAAGGCAAGACTTCAAGCTAGACAGGTTAAAAATGGAGACAAGAGACACCATTATAAAGGTACGAGGGACGCTATTTTTAAGATGATCCGCTACGAAGGGATCAACGGATTTTACAAAGGAATGGGAACCAAAATTGTACAAAGTGTTTTAGCTGCAGCTGTTTTGTTTATGGTGAAGGAAGAACTAGTTAAGCAGACACGTTTCTTGCTTGGAAAGAATGTTCCCAACACTTTAAAGCCATAG 1002 0.4341 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKNNKSLGTFQQMCQVVKHEGWERLYGGLTPSLVGTATSQGVYYYFYQIFRNRAEAAALEKKMLGNGDGSVGMFSSLIVAALSGCVNVLLTNPIWLVVTRMQTHKKESKRTIPDPRLSDATEQKPLSAVEPHAYGTSHVIQEVYDESGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKRSASNTVSALQIFLLGAIAKLGATVVTYPLLVVKARLQARQVKNGDKRHHYKGTRDAIFKMIRYEGINGFYKGMGTKIVQSVLAAAVLFMVKEELVKQTRFLLGKNVPNTLKP* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0837 333 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 330 - -
Psa2g0837 333 Pfam Mitochondrial carrier protein 227 316 IPR018108 -
Psa2g0837 333 Pfam Mitochondrial carrier protein 109 221 IPR018108 -
Psa2g0837 333 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Psa2g0837 333 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 330 IPR044712 GO:0006862|GO:0055085
Psa2g0837 333 Gene3D Mitochondrial carrier domain 95 320 IPR023395 -
Psa2g0837 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Psa2g0837 333 SUPERFAMILY Mitochondrial carrier 3 314 IPR023395 -
Psa2g0837 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 318 IPR018108 -
Psa2g0837 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0837 Psa-Chr2 51304942 51310283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0837 24 317 Chloroplast and Mitochondria Gene Families AT1G25380 28.571 3.65e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0837 K13354 - gmx:100775784 503.827