Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0827 ATGCCTTCTTCTTCCCCTACCTTGCTCTCAAAATGTACTATTTTCCCAGACCAAAAATCAACTACTGGAAACCTTAAACTCTCTGTTTCAGACCTACCTATGCTTTCTTGTCATTACATCCAAAAAGGTTGTCTCTTCACCAAACCTTCAATTCCCTTTCATAATTTAATCCCTCTCCTCAAAACTGCTCTCTCTCAAACTCTCTCTATCTTTCCACCACTCGCCGGTCGTTTCACCACCGACTCCGATGGCTACGTTTACCTTACTTGCAATGATGCCGGCGTCGATTTCATTCACGCCATTGCCACTGAACTTAACATCAGTAACCTCCTCTCAACCACCGATGTTCATGAATCCTTCAAAGAGTTTTTCACTTTTGATAGAAAAGTGAGTTTCACCGGTCATTTCTCTCCGATTTTGGCCGTTCAGGTAACCGAACTCGCTGACGGCTTTTTTATCGGATGCTCCGTTAATCACGCCGTCACAGATGGAACTTCCTTCTGGAATTTCTTCAACACTTTTGCGCAAGTTTGCAGAGGAGCAAACAAATGTCTCCGAAACTCTCCGAGCTTCCGCCGTGACTCGGTTTTAATCTCCGACGCCGTTCTTCGGTTATCCAAAGAAGGTCCCGCGGTGACATTCAATGCCGATGCGCCGATCAGAGAAAGAATCTTTAGCTTCAACCGCGAAGCAATTCAGAAACTGAAAGCCAGAGCTAATAACAAACGGTGGCCAGAAACTATCAATTCCGTTGAATCAATGCAGAAACACATGAACGATCACTATAACAGTAACAACAACAACAACCAGAAAGAAAACGGGAAAGTAGCGACGTTAATTGAAAACTGGTTCAAAACCAATGCTCACCCGAAACAGCAGACGGTTACCGTCACGGAAACAGAAACAGAAACGGTTGAGATTTCTTCGTTCCAATCGATATGCGCGTTGTTGTGGCGTGCAGTCACGCGCGCGAGGAAATTTCCTGCTTCAAAAACGACGACGTTTAGAATGGCGGTTAATTGTCGTCATAGACTAGAACCAAAACTAGAAGCGTTTTATTTTGGAAACGCGATTCAGAGTGTTCCAACTTACGCTTCAGCAGGTGATGTTATGTCTAAGGACTTACGGTGGTGTGCGGAGCAGCTGAATAAAAACGTGAAGGTGCATGATAATGTTATGGTGAGGAAGTACATAGAGGATTGGGAGAACAATCCTAGGTGTTTTCCTTTGGGGAACCCTGATGGTAGTTCTATAACCATGGGTAGTTCTCCGAGGTTTCCGATGTACGATAACGATTTTGGTTGGGGGAAGCCATTGGCGGTTAGGAGTGGAAAAGCGAATAAATTCGACGGTAAGATCTCAGCGTTTCCGGGGAGAGATGGAAGTGGGACCGTTGATTTGGAGGTTGTTTTGGCGCCAGAAACTATGGCGGGGCTTGAGAGTGATGCGGAGTTTATGGCTTATGCGACGAGGCAGTTGTAA 1482 0.4534 MPSSSPTLLSKCTIFPDQKSTTGNLKLSVSDLPMLSCHYIQKGCLFTKPSIPFHNLIPLLKTALSQTLSIFPPLAGRFTTDSDGYVYLTCNDAGVDFIHAIATELNISNLLSTTDVHESFKEFFTFDRKVSFTGHFSPILAVQVTELADGFFIGCSVNHAVTDGTSFWNFFNTFAQVCRGANKCLRNSPSFRRDSVLISDAVLRLSKEGPAVTFNADAPIRERIFSFNREAIQKLKARANNKRWPETINSVESMQKHMNDHYNSNNNNNQKENGKVATLIENWFKTNAHPKQQTVTVTETETETVEISSFQSICALLWRAVTRARKFPASKTTTFRMAVNCRHRLEPKLEAFYFGNAIQSVPTYASAGDVMSKDLRWCAEQLNKNVKVHDNVMVRKYIEDWENNPRCFPLGNPDGSSITMGSSPRFPMYDNDFGWGKPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDAEFMAYATRQL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0827 493 Pfam Transferase family 7 486 - -
Psa2g0827 493 Gene3D - 219 485 IPR023213 -
Psa2g0827 493 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 488 - -
Psa2g0827 493 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 6 488 - -
Psa2g0827 493 Gene3D - 7 206 IPR023213 -
Psa2g0827 493 SUPERFAMILY CoA-dependent acyltransferases 37 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0827 Psa-Chr2 50678853 50681043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0827 59 480 Monolignol Biosynthesis Gene Families AT5G48930 25.968 1.88e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0827 - - gmx:100779616 775.393