Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0809 ATGGAAGATAGTATGAATATGTCAGGCTTTTGCATGAGATCATCGTCTGGAAGTAGCAGCACTGGCACAAAGTGTGGCCGTTGGAATCCAACGACAGAACAAGTTAAACATCTGACTCAACTTTTTAGAGCAGGGCTCAGAACTCCAAGCACTGATCAAATTCAAAAGATATCCAATCAACTCAGTTTTTATGGTAAGATTGAGAGCAAGAATGTGTTCTATTGGTTTCAAAATCATAAGGCTAGGGAAAGACAAAAACGTCGGAAGGTTTCTTTTGATGATGATAAGGATGTTATTGTTCATCATAGAGACAACTCCATGCATGCTTCTAAACAAAAGTTTGTTGAGATGTACTCAGAGCCTAATAGGGTGATTGAGACTCTTGAGCTTTTTCCATTGAACTCCTTTGGTGAATCAGAATCAGAATCTGAGAAGCTGAGTATGCATGTGAATGAAAGTAGGGAAAATCCTATATTTGCTTACACATGCACAATGGGTGAGCAAATAGAGCATCCACCATTAGACTTGCGGTTGAGCTTTGTGTAA 546 0.3919 MEDSMNMSGFCMRSSSGSSSTGTKCGRWNPTTEQVKHLTQLFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDDKDVIVHHRDNSMHASKQKFVEMYSEPNRVIETLELFPLNSFGESESESEKLSMHVNESRENPIFAYTCTMGEQIEHPPLDLRLSFV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0809 181 SUPERFAMILY Homeodomain-like 17 89 IPR009057 -
Psa2g0809 181 MobiDBLite consensus disorder prediction 1 26 - -
Psa2g0809 181 SMART HOX_1 23 90 IPR001356 GO:0003677
Psa2g0809 181 CDD homeodomain 27 87 IPR001356 GO:0003677
Psa2g0809 181 Gene3D - 24 92 - -
Psa2g0809 181 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
Psa2g0809 181 PANTHER WUSCHEL-RELATED HOMEOBOX 7 6 166 - -
Psa2g0809 181 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Psa2g0809 181 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 166 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0809 Psa-Chr2 49409820 49411038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0809 4 181 Wox Gene Family AT3G11260 54.839 3.62e-60 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Psa2g0809 Homeodomain 7.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0809 - - cam:101494967 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0809 2 49409820 49411038 Psa2g0809 2 49409820 49411038 ECH
Psa5g2964 5 228652781 228654487 Psa2g0809 2 49409820 49411038 PCT