Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0800 ATGACGGTCGTCAGGATTGTCAAGCTGACTATCATCTCTTCAGAATGCAGAGGGGTACTGTCTGTTTCATTACAGTCGTCTGTTCCTAGTCATCACAGTAATAGTTTTAAATTGCGGTTGTGGTCGCGGATGTACGTGCGGTTGGGAGTCACATGTGGTCGTCGTCACAAGAGAGTCTCTGTCTTGCGTTTGGAGAACCAAAAATTGGGTGGCACTCTTGGTCCATCCTTAGGAAATCTAACATTTCTTAGATTTCTCATACTTTTCAACATCGATTTGCATGGTGAAATTCCAAAACAAGTTGGTCGATTGAAAAGGTTGCAAGGTTTTGACTTAAGCAACAATAATCTTCGGGGAGAGATTCCGATGGAGCTCACTAACTGCACTAATATCAAGGAATTTTTTTTGGAGTATAATAAACTCACAGGAAGAATTCCGGCACGGTTAGGGTCAATCATTCAACTTAATGAATTGAGTCTCCAGTCAAATAAACTAACCGGTACTATTCCATCTTCTCTGGGAAATATTTCCTCCCTCGTAGAAATATCTCTTATAGATAATTACTTGGAAGGAAGTATCCCTTATTCTTTGGGTAAATTGTCAAGTTTGAAAATGCTTTATCTAGCTTTAAATAATTTGTCAGGTGAAATTCCTCCTTCACTTTACAACCTATCAAATATTGAATTTTTCAGTCTTGGAGGAAACAAGTTATTGGGTAGTCTTCCATCAAATATAGATATTGTTTTTCCCAATATTAAAGATTTCTTAGTAGGAGGGAACCAAATTAGCGGAACTTTACCAGCTTCAATATCCAACCTCACTGAATTGCGATATTTAGAAATATCATGGAATCTTTTAAATGGGCCAATACCTCTTACTTTAGGTAGACTGAACAAACTTGAGATTTTTCGTATTAGTGCTAATAATTTTGGGAGTGGAGGAGCTCATGATTTGGACTTCCTTGCTTCCTTAACCAATTGTACTAAATTGTCAAAGTTTGAAATTTTCAAAAACAGATTTGGTGGCAAATTGTCAGATCATATAGGAAACTTATCCATCCATCTGATTGGGTTTGATGTGAGGTATAACCAAATTAATGGAGTGATACCTGAGAGAATAGGACAACTAATTGGTTTAACTTACTTAAGCATCGGAAACAATTTCCTTGAGGGAACAATTCCAAATTCAGTTGGAAAACTTAAGAATCTTGTAATATTAGACTTGCAAGAAAACAAATTATCTGATAGTATTCCTTTAAGTATTGGAAATCTTACTATTTTGTCTGAATTATATCTTTCAGATAATAAATTAGAAGGAAGTGTTCCATTCTCTCTCAGATATTGCACCCAATTGTTGATCTTAAGTATTTCTATAAATAAACTGAGTGGTGATTTACCAAATCAAACATTTAGATATCTAGATAGTGTAATATATATTTACTTGAGCAACAACTCTTTGACTGGTCCCATTCCTTCAGAGTTTGGTAATTTGAAGCATCTTTCACATTTGTATCTACACTCAAATAATCTGTTTGGTGAAATTCCAAAGGATCTTGCTTCTTGTTTGACATTAACAAGGCTGGTGTTGTGGGGAAACTTTTTTCATGGAAAAATACCTCAGTTCTTGGGCTCTTTAAAATCCCTTGAAATGTTAGATATTTCTAATAACAATTTCTCAAACACAATCCCCTTTGAACTAGAAAACCTTATCTTTTTGAATAAGTTAGATATATCTTTTAACGATCTATATGGTGAGGTTCCCATAGGTGGTGTCTTTAGCAATGTCACAGCAATTTCATTAATTGGAAACAAGAACCTTTGTGGAGGGATACCTCAATTGAAGCTTCCAAGATGTGTTGGGGATTCCTCCAAGAAACCTAAGATGTCTCTCAAAAAGAAACTTATCATCATCAGTGTAATTGGGGGTGTTTTGATCTCTTTCCTAGCTTTTATAACTGTCCATTTTCTCACGAGAAAGTCCAAAAAGTTACCTTCTTCACCCTCTCTTCAAAATAGGGCACTAAGAGTTACTTACGGAGAGTTACATGAAGCAACCAATGGATTTTCTTTATCCAATTTGGTAGGGACGGGAAGTTTTGGATCTGTTTTTAAAGGATATCTCCCCAACTTTGAAAGGCCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGAGGGGCAGCAAAGAGTTTTGTGGCAGAATGCAATGCTTTAGGAAAGATGAAACACCGGAATCTTGTGAAGATCCTAACTTGTTGTTCAAGTGTTGATTACAAGGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCCTGAAGGGAGTCTTGAAAATGTGTTGCATAATAATGAAGGGTCTGAAAAGAAAATCGATATCTCATCCTCTCTCAAAAGGGAAGACATTGCTCTTGAATGTAGCCACTGCTTTGATTATCTCCACCAGATGAGACCAAGTTGTATCATTGTGAATATTAAACCAAGCAGATGTTTCTTCTTGAATGAAGATATGGTAGCCACTGAACTTTGGCTAGCTAGGCTCATGCATGATCAACAAACATTCATGTAA 2562 0.3618 MTVVRIVKLTIISSECRGVLSVSLQSSVPSHHSNSFKLRLWSRMYVRLGVTCGRRHKRVSVLRLENQKLGGTLGPSLGNLTFLRFLILFNIDLHGEIPKQVGRLKRLQGFDLSNNNLRGEIPMELTNCTNIKEFFLEYNKLTGRIPARLGSIIQLNELSLQSNKLTGTIPSSLGNISSLVEISLIDNYLEGSIPYSLGKLSSLKMLYLALNNLSGEIPPSLYNLSNIEFFSLGGNKLLGSLPSNIDIVFPNIKDFLVGGNQISGTLPASISNLTELRYLEISWNLLNGPIPLTLGRLNKLEIFRISANNFGSGGAHDLDFLASLTNCTKLSKFEIFKNRFGGKLSDHIGNLSIHLIGFDVRYNQINGVIPERIGQLIGLTYLSIGNNFLEGTIPNSVGKLKNLVILDLQENKLSDSIPLSIGNLTILSELYLSDNKLEGSVPFSLRYCTQLLILSISINKLSGDLPNQTFRYLDSVIYIYLSNNSLTGPIPSEFGNLKHLSHLYLHSNNLFGEIPKDLASCLTLTRLVLWGNFFHGKIPQFLGSLKSLEMLDISNNNFSNTIPFELENLIFLNKLDISFNDLYGEVPIGGVFSNVTAISLIGNKNLCGGIPQLKLPRCVGDSSKKPKMSLKKKLIIISVIGGVLISFLAFITVHFLTRKSKKLPSSPSLQNRALRVTYGELHEATNGFSLSNLVGTGSFGSVFKGYLPNFERPIAVKVLNLETRGAAKSFVAECNALGKMKHRNLVKILTCCSSVDYKGEDFKAIVFEFMPEGSLENVLHNNEGSEKKIDISSSLKREDIALECSHCFDYLHQMRPSCIIVNIKPSRCFFLNEDMVATELWLARLMHDQQTFM* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0800 853 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 48 848 - -
Psa2g0800 853 SUPERFAMILY Protein kinase-like (PK-like) 663 836 IPR011009 -
Psa2g0800 853 Gene3D Ribonuclease Inhibitor 152 317 IPR032675 -
Psa2g0800 853 SUPERFAMILY L domain-like 46 351 - -
Psa2g0800 853 Pfam Protein tyrosine and serine/threonine kinase 690 814 IPR001245 GO:0004672|GO:0006468
Psa2g0800 853 Gene3D Ribonuclease Inhibitor 318 627 IPR032675 -
Psa2g0800 853 Gene3D Ribonuclease Inhibitor 20 149 IPR032675 -
Psa2g0800 853 PANTHER LRR RECEPTOR-LIKE KINASE 48 848 - -
Psa2g0800 853 ProSiteProfiles Protein kinase domain profile. 688 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0800 853 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Psa2g0800 853 Gene3D Transferase(Phosphotransferase) domain 1 680 851 - -
Psa2g0800 853 Pfam Leucine rich repeat 378 437 IPR001611 GO:0005515
Psa2g0800 853 Pfam Leucine rich repeat 451 510 IPR001611 GO:0005515
Psa2g0800 853 SUPERFAMILY L domain-like 354 608 - -
Psa2g0800 853 SMART LRR_typ_2 400 424 IPR003591 -
Psa2g0800 853 SMART LRR_typ_2 200 224 IPR003591 -
Psa2g0800 853 SMART LRR_typ_2 104 128 IPR003591 -
Psa2g0800 853 SMART LRR_typ_2 545 569 IPR003591 -
Psa2g0800 853 SMART LRR_typ_2 497 521 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0800 Psa-Chr2 48869636 48875004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0800 28 852 Receptor kinase-like Gene Family AT3G47570 41.429 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa2g0800 PK_Tyr_Ser-Thr 1.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0800 - - mtr:MTR_1g029940 977.622