Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0799 ATGAGGACATGTATGATGTTGGTTTATAGCGTGACATTAGTATCGATTGCTGTTTCTTTGAGTTCAAACACTGATAAGTTAGCTTTACTTTCTTTGAAGGAAAAACTTACAAATGGGGTGCCTAATTCTCTACCATCATGGAATCATTCTTTGGATTTCTGTGAATGGCAGGGAGTCACATGTGGTCGTCGTCACAAGAGAGTCTCTAACAAGAGAGTCTCTCTCTTGCATTTGGAGAACCAAACATGGGGTGGCACTCTTGCTCCATCCTTAGGAAATCTAACCTTTCTTAGATTTCTCATACTTTTCAACATCGATTTGCATGGTGAAATTCCAAAACAAGTTGGTCGATTGAAAAGGTTGCAAGCTCTTGACTTAAGCAACAATAATCTTCGGGGAGAGATTCCGATGGAGCTCACTAACTGCACTAATATCAAGGTAATTGTTTTGCAGTATAATAAACTCACAGGAAGAATTCCGACACGGTTAGGGTCAATCATTCAACTTAATGAATTGAGTCTCCAGTCAAATAAACTAAGCGGTACTATTCCATCTTCTCTAGGAAATATTTCCTCACTAGTAGAAATATCTCTTATAGATAATTACTTGGAAGGAAGTATTCCTTATTCTTTGGGTAAATTGTCAAGTTTGAAAATGCTTTATCTAGCTTTAAATAATTTGTCAGGTGAAATTCCTCCTTCACTTTACAATCTATCAAATATTGAATTTTTCAGTCTTGGAGGAAACAAATTATTGGGTAGTCTTCCATCAAATATAGATATTGTTTTTCCCAATATTAAAGATTTCTTAGTAGGAGGGAACCAAATTAGCGGAACTTTACCAGCTTCAATATCCAACCTCACTGAATTGCGACATTTTGAAATATCATGGAATCTTTTAAATGGGCCAATACCTCTTACTTTAGGTAGATTGAACAAACTTGAGAAGTTTCGCATTAGTGCTAATAATTTTGGGAGTGGAGGAGCTCATGATTTGGACTTCCTTGCTTCCTTAACCAATTGTACTAAATTGTCAAAGCTTGAAATTTTCAAAAACAGATTTGGTGGCAAATTGTCAGATCATATAGGAAACTTATCCATCCATCTGATTGGGTTTGATGTGAGGTATAACCAAATTTATGGAGTGATACCTGAGAGAATAGGACAACTAATCGGTTTAACTTACTTAAGCATCGGAAACAATTTCCTTGAGGGAACAATTCCAAATTCAGTTGGAAAACTTAAGAATCTTGTATTGTTAGACTTGGAAAACAATAAAATATCTGGTAATATCTTTACTAGTATTGGCAATCTTACTATATTGTCTGAATTATATTTGTCTAGCAATAAACTGAAAGGAAGAATTCCAGTTACCCTCAAACATTGCACCCAGTTGGAGACATTAGGTATTTCTGATAACAAATTGAGTGGTGATATACCAAATCAAACATTTGTCTATCTAACAAATTTAGTAAACCTTGACTTGTCTATCAACTCCCTCACCGGTCTCATTCCTTTAGAATTTGGTAAGTTGAAGCATATTTCTATGTTGTATTTATTTCAAAACAACTTGTCTGGTGAAATCCCCAATCAACTTGGTGCTTGTGTTACTTTAACAGAGCTTAGGTTGTGGGAAAACTTTTTTCATGGAGATGTGACTTCCTTTTTGAGATCTTTAAGTTCTTTAAAAGTCTTAGATATGTCTAATAACAATTTCTCAAGCACAATTCCCTTTGAACTAGAAAATTTCACACTTCTAAATACTTTGGATCTATCTTTCAATAACTTCTATGGCGAGGTTCCCATAGGTGGTGTCTTTAGCAATGTCACAGCAATTTCATTAATTGGAAACAAGAACCTTTGTGGAGGGATACCTCAATTGAAGCTTCCAAAATGCATTAAGGCTTCCTCCAAGAAACCTAAGATGTCTCTCAAAAAGAAACTTATCATCATCAGTGTAATTGGGGGTGTTTTGATCTCTTTCCTAGCTTTTATAACTGTCCATTTTCTAACGAGAAAGCCCAAAAAATTACCTTCTTCACCATCTCTACAAAATAGGTTATTTAGCGTGACTTATGGAGATCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGACAGGGAAGCTTTGGTTCGGTTTACAGAGGATCGCTTCTTAACTTTGAAGGACCTATTGCTGTAAAAGTGTTGAAGCTTGAAACGCGTGGTGCAGCAAAGAGTTTTGTGGCAGAATGCAATGCTTTAGGAAAGATAAAACACCGGAATCTTGTTAAGATCTTAACTTGTTGTTCAAGTGTTGATTACAAGGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCCTGAAGGGAGTCTTGAAACTGTGTTGCATAATAATGAAGGGTCTGAAAATGAAAATCATAATCTCATCCTCTCAAAAAGGGTAGACATTGCTCTTGATGTAGCTCATGCTTTGGATTATCTTCACCATGATGAAGACCAAGTTGTAGTTCATTGTGATATCAAGCCAAGCAATGTTCTTCTTGATGAAGATAATGTAGCTCACTTGGGAGACTTTGGCTTAGCTAGGCTCATTCATGGATCAACAAGACATTCAAGTAAAGATCAAGTTGACTCCTCAACAATTAAAGGAACTATAGGATATCTTCCTCCTGAGTATGGAGCTGGTGGTCCGGTAACACCAGAGGGAGATATCTACAGCTATGGGATTCTGTTGTTGGAAATGCTTACTGGAAAGAGACCAACAGATAATATCTTTTATGAGAATCTTAGTCTACACAAATTGTGTAAGATGAAAATTCCTGAAGAAATTCTTGACATTATAGATTCAAGTATGGTTATGCCAACTGTTGAAGATCAGACATGGATTGTAGAAAATAACATAAAAGAGTGTCTAGTGATGTTTGCTACAATAGGAGTTGCATGTTCTGAAGAATTTCCTGCTCAGAGAATGCTCACAAAACATGTCATACTGAAGTTGCTTGAAATTAAACAGAAGTTGTCCCGTTAG 3021 0.3601 MRTCMMLVYSVTLVSIAVSLSSNTDKLALLSLKEKLTNGVPNSLPSWNHSLDFCEWQGVTCGRRHKRVSNKRVSLLHLENQTWGGTLAPSLGNLTFLRFLILFNIDLHGEIPKQVGRLKRLQALDLSNNNLRGEIPMELTNCTNIKVIVLQYNKLTGRIPTRLGSIIQLNELSLQSNKLSGTIPSSLGNISSLVEISLIDNYLEGSIPYSLGKLSSLKMLYLALNNLSGEIPPSLYNLSNIEFFSLGGNKLLGSLPSNIDIVFPNIKDFLVGGNQISGTLPASISNLTELRHFEISWNLLNGPIPLTLGRLNKLEKFRISANNFGSGGAHDLDFLASLTNCTKLSKLEIFKNRFGGKLSDHIGNLSIHLIGFDVRYNQIYGVIPERIGQLIGLTYLSIGNNFLEGTIPNSVGKLKNLVLLDLENNKISGNIFTSIGNLTILSELYLSSNKLKGRIPVTLKHCTQLETLGISDNKLSGDIPNQTFVYLTNLVNLDLSINSLTGLIPLEFGKLKHISMLYLFQNNLSGEIPNQLGACVTLTELRLWENFFHGDVTSFLRSLSSLKVLDMSNNNFSSTIPFELENFTLLNTLDLSFNNFYGEVPIGGVFSNVTAISLIGNKNLCGGIPQLKLPKCIKASSKKPKMSLKKKLIIISVIGGVLISFLAFITVHFLTRKPKKLPSSPSLQNRLFSVTYGDLHEATNGFSSSNLVGQGSFGSVYRGSLLNFEGPIAVKVLKLETRGAAKSFVAECNALGKIKHRNLVKILTCCSSVDYKGEDFKAIVFEFMPEGSLETVLHNNEGSENENHNLILSKRVDIALDVAHALDYLHHDEDQVVVHCDIKPSNVLLDEDNVAHLGDFGLARLIHGSTRHSSKDQVDSSTIKGTIGYLPPEYGAGGPVTPEGDIYSYGILLLEMLTGKRPTDNIFYENLSLHKLCKMKIPEEILDIIDSSMVMPTVEDQTWIVENNIKECLVMFATIGVACSEEFPAQRMLTKHVILKLLEIKQKLSR* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0799 1006 Gene3D Phosphorylase Kinase; domain 1 666 783 - -
Psa2g0799 1006 SMART serkin_6 702 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0799 1006 PANTHER LRR RECEPTOR-LIKE KINASE 25 1005 - -
Psa2g0799 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Psa2g0799 1006 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
Psa2g0799 1006 Pfam Protein kinase domain 704 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0799 1006 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Psa2g0799 1006 Gene3D Ribonuclease Inhibitor 331 640 IPR032675 -
Psa2g0799 1006 ProSiteProfiles Protein kinase domain profile. 702 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0799 1006 Gene3D Ribonuclease Inhibitor 264 330 IPR032675 -
Psa2g0799 1006 Gene3D Ribonuclease Inhibitor 189 263 IPR032675 -
Psa2g0799 1006 Pfam Leucine Rich Repeat 393 414 IPR001611 GO:0005515
Psa2g0799 1006 SMART LRR_typ_2 214 238 IPR003591 -
Psa2g0799 1006 SMART LRR_typ_2 559 583 IPR003591 -
Psa2g0799 1006 SMART LRR_typ_2 118 142 IPR003591 -
Psa2g0799 1006 SMART LRR_typ_2 511 535 IPR003591 -
Psa2g0799 1006 SMART LRR_typ_2 414 434 IPR003591 -
Psa2g0799 1006 SMART LRR_typ_2 438 462 IPR003591 -
Psa2g0799 1006 SMART LRR_typ_2 487 510 IPR003591 -
Psa2g0799 1006 PRINTS Leucine-rich repeat signature 121 134 - -
Psa2g0799 1006 PRINTS Leucine-rich repeat signature 559 572 - -
Psa2g0799 1006 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 25 1005 - -
Psa2g0799 1006 Gene3D Transferase(Phosphotransferase) domain 1 784 1006 - -
Psa2g0799 1006 Gene3D Ribonuclease Inhibitor 21 186 IPR032675 -
Psa2g0799 1006 SMART LRR_sd22_2 559 580 - -
Psa2g0799 1006 SMART LRR_sd22_2 263 289 - -
Psa2g0799 1006 SMART LRR_sd22_2 118 141 - -
Psa2g0799 1006 SMART LRR_sd22_2 214 240 - -
Psa2g0799 1006 SMART LRR_sd22_2 414 440 - -
Psa2g0799 1006 SMART LRR_sd22_2 487 508 - -
Psa2g0799 1006 SUPERFAMILY L domain-like 368 622 - -
Psa2g0799 1006 SUPERFAMILY Protein kinase-like (PK-like) 677 988 IPR011009 -
Psa2g0799 1006 SUPERFAMILY L domain-like 47 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0799 Psa-Chr2 48773736 48777320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0799 20 1004 Receptor kinase-like Gene Family AT3G47570 43.417 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa2g0799 Pkinase 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0799 - - mtr:MTR_1g029940 1228.77