Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0795 ATGGGAACTATTATGTTTACCTTTCTACTTTGTTTTGCTAGCCAAATGTTGGTGTATTATCTGATGCCATCAACGGTTGCTGCTCTTTCTTTGAGTTCAGAGAGTGATAAGCTTGCTTTACTTGCTTTGAAAGAAAAACTTACAAATGGTGTTCCTGAATCTCTGCCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAGGGGGTTACATGTGGCCGTCGTCACATGAGAGTCTCTAGCTTACAGTTGGCGAATCAAACATGGGGTGGTACTCTTGGACCATCCTTGGGAAATCTAACATTTCTGAAACTACTCATGCTTAGAAACCTCGCTTTACACGGTGAAATTCCACCTCAAATCGGTCGTTTGAAGCGATTGCAAAATCTTATCTTAGGCGGCAACAAACTTGAAGGAGAAATTCCTACAGAGCTCTCAAACTGCACAAATCTAGAAGCAATTGAATTGCAGCACAATCACCTCACCGGAAGAGTCCCTTCATGGTTTGGATCGATGCAACTTACTTGGTTGGACCTTGCTTCCAATAATCTAGTTGCCACTATTCCACCTTCCCTGGGAAATATTTCATCACTTGCATATTTATCTCTTTCACAGAATCACTTGGCCGGAAACATACCTCATGCTTTGGGTAAGTTGTCAGCTTTGGAAACATTGGCTCTAGATTTAAATAATCTGTCCGGCCAAATTCCTGATTCTCTTTACAATCTATCAAATATTCAATCATTTGTTCTTGTAGAAAACAAGTTATTCGGTAGTCTTCCATCAAATTTGAATCTTGCTTTTCCTAAGCTTGAAGAATTTTTGGTTGGAGGGAACCAAATAAGTGGAGCTTTTCCATCTTCAATATCGAACATCACCGATTTAAAAAGGTTTGATATCGCTCGTAATGCTTTTAGTGGACCAATACCTCTTACTTTGGGTCAATTAAATAAACTTGACAGTATTGATATAGGTGATAATAACTTTGGAAGTGGAGGAGCTCGTGATTTGGATTTCCTTTCTTCACTAACCAATTGTACTAAATTATCATTGCTCTCTTTTTATAAGAATAGATTTGGTGGTCAGTTTCCAGATCTTATAGGAAACTTTTCCAATCTCCTTATTCTTGATATTTCATTTAACCAAATATATGGGGCTATACCTGAAAAGATAGGAAAACTAATTAGTTTAACTAGCTTAGACATTGGGTTCAATCACCTTGAAGGAACAATTCCAAGTTCAATTGGAATGCTCAAGAATATAGGACGATTGGTCTTGCAATCAAACAAGTTATCCGGTAATATTCCACTGAGTATTGGAAATCTTACTATATTGTCTCAACTATTTCTTGCTGCCAATCAATTACAAGGAAGCATTCCAGTTACCTTGAGATATTGCACTAAGTTGGAAACAGTAATTTTGGGTATTAACAATTTAAGTGGTAATATACCCAATGAAACTTTTGGTTATCTAAGAGGTTTAGTATTACTTGTCTTGTCCAACAATAGCTTCACTGGTGAAATTCCTTCAGAGTTTGGTAACTTGGACCAACTTTCCCAATTGTTTATTCACTCAAATAAGTTATCCGGTGAAATTCCAAATCAACTTGGTGGCTGTTCCTCGTTAACAAAGTTAATCTTGAGGGAAAATTTCTTCCATGGAAATATACCTAGCTTCTTGGGCTCCTCTATACGGTCCCTCGACGCGTTAGACCTTTCTAGAAATAATTTCTCAGGAACAATCCCCTTTGAACTAGAAAATCTAACACTTTTGAATTTTCTAGACTTGTCTTTCAACAATCTCTATGGAGAGGTTCCCACCAGGGGTGTCTTTAGCAATGCCTCGCAATTTTCACTATCCGGAAACAATAACCTCTGTGGCGGGATCCCTCAATTGAAGCTTCATGCATGCTTTAGGCCCCCCTCAAGGAAACACAAGAGATCGCTAAAAAAGAAACTTATCATCATCATCATCATCAGTGTAATTGGTGGAATTTTGATCTTTTTTATAACTTTTCTAGCTGTCCATTCTCTCACTAGAAAGCGGAAAAGGTTACCTTCTTCGCCAATATCTTTGCAAAATGAAAGCTTAAGGGTTACATATGGAGATCTACATGAAGCAACCAATGGATTTTCATCTTCAAATTTGGTAGGAGTTGGAAGTTTTGGCTCTGTTTACAAAGGATCGCTTCTCAACTTTGAAAGGCGTGTTGCTGTAAAGGTGTTGAATCTTGAAACACGTGGGGCAGCAAAGAGTTTCGTGGCAGAATGCAATGCTTTAGGAAAGATGAAACACCGGAATCTTGTTAAGATCTTAACTTGTTGTTCAAGTGTTGATTACAAGGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCCTGAAGGGAGTCTTGAAAATGTGTTGCATAATAATGAAGGGTCTGAAAATGAAAATGATAGTCTCATCCTCTCAAAAAGGGTAGACATTGCTCTTGATGTAGCTCATGCTTGGATTATCTTCACCATGATGAAGACCAAGTTGTAG 2526 0.3804 MGTIMFTFLLCFASQMLVYYLMPSTVAALSLSSESDKLALLALKEKLTNGVPESLPSWNESLHFCEWQGVTCGRRHMRVSSLQLANQTWGGTLGPSLGNLTFLKLLMLRNLALHGEIPPQIGRLKRLQNLILGGNKLEGEIPTELSNCTNLEAIELQHNHLTGRVPSWFGSMQLTWLDLASNNLVATIPPSLGNISSLAYLSLSQNHLAGNIPHALGKLSALETLALDLNNLSGQIPDSLYNLSNIQSFVLVENKLFGSLPSNLNLAFPKLEEFLVGGNQISGAFPSSISNITDLKRFDIARNAFSGPIPLTLGQLNKLDSIDIGDNNFGSGGARDLDFLSSLTNCTKLSLLSFYKNRFGGQFPDLIGNFSNLLILDISFNQIYGAIPEKIGKLISLTSLDIGFNHLEGTIPSSIGMLKNIGRLVLQSNKLSGNIPLSIGNLTILSQLFLAANQLQGSIPVTLRYCTKLETVILGINNLSGNIPNETFGYLRGLVLLVLSNNSFTGEIPSEFGNLDQLSQLFIHSNKLSGEIPNQLGGCSSLTKLILRENFFHGNIPSFLGSSIRSLDALDLSRNNFSGTIPFELENLTLLNFLDLSFNNLYGEVPTRGVFSNASQFSLSGNNNLCGGIPQLKLHACFRPPSRKHKRSLKKKLIIIIIISVIGGILIFFITFLAVHSLTRKRKRLPSSPISLQNESLRVTYGDLHEATNGFSSSNLVGVGSFGSVYKGSLLNFERRVAVKVLNLETRGAAKSFVAECNALGKMKHRNLVKILTCCSSVDYKGEDFKAIVFEFMPEGSLENVLHNNEGSENENDSLILSKRVDIALDVAHAWIIFTMMKTKL* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0795 841 SUPERFAMILY L domain-like 343 627 - -
Psa2g0795 841 ProSiteProfiles Protein kinase domain profile. 711 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0795 841 Gene3D Ribonuclease Inhibitor 189 337 IPR032675 -
Psa2g0795 841 Gene3D Ribonuclease Inhibitor 338 642 IPR032675 -
Psa2g0795 841 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Psa2g0795 841 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 830 - -
Psa2g0795 841 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Psa2g0795 841 Pfam Protein tyrosine and serine/threonine kinase 715 830 IPR001245 GO:0004672|GO:0006468
Psa2g0795 841 PANTHER LRR RECEPTOR-LIKE KINASE 19 830 - -
Psa2g0795 841 SUPERFAMILY L domain-like 33 329 - -
Psa2g0795 841 Gene3D Transferase(Phosphotransferase) domain 1 703 832 - -
Psa2g0795 841 SUPERFAMILY Protein kinase-like (PK-like) 690 830 IPR011009 -
Psa2g0795 841 Pfam Leucine rich repeat 468 528 IPR001611 GO:0005515
Psa2g0795 841 Pfam Leucine rich repeat 126 184 IPR001611 GO:0005515
Psa2g0795 841 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Psa2g0795 841 SMART LRR_typ_2 394 418 IPR003591 -
Psa2g0795 841 SMART LRR_typ_2 491 514 IPR003591 -
Psa2g0795 841 SMART LRR_typ_2 219 243 IPR003591 -
Psa2g0795 841 SMART LRR_typ_2 515 539 IPR003591 -
Psa2g0795 841 SMART LRR_typ_2 124 148 IPR003591 -
Psa2g0795 841 SMART LRR_typ_2 588 613 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0795 Psa-Chr2 48647296 48650873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0795 32 828 Receptor kinase-like Gene Family AT3G47570 42.840 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa2g0795 PK_Tyr_Ser-Thr 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0795 - - mtr:MTR_1g029940 953.74