Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0793 ATGGCACCAAAACCAACCAAAGCCGAGAAGAAGCAATCTTACGATGCCAAGCTATGCCAGCTTCTAGACGAGTTTTCTCAGATTCTTATTGTGAATGCTGATAATGTTGGATCTAAGCAGCTTCAGAATATTCGAAGCGGTCTACGTGGGGATTCTGTAGTTCTTATGGGGAAGAACACTATGATGAAGAGATCTGTTAGGATGCATGCTGAAAAGACTGGGAACAATGCTTTTATCAACCTGATTCCTCTCCTTGTTGGAAACGTTGGTTTGATTTTCACCAAAGGAGATTTGAAAGAGGTTAGCGAGGAAGTTGCCAAGTACAAGGTTGGAGCTCCTGCTCGTGTTGGTTTGGTTGCTCCCATTGATGTTGTTGTTCCACCAGGCAACACAGGTCTCGACCCATCCCAAACCTCTTTCTTCCAGGTGCTCAACATTCCCACAAAGATTAACAAGGGTACTGTTGAAATCATTACACCTGTTGAACTCATCAAGAAGGGAGACAAGGTTGGATCTTCTGAAGCTGCATTGCTTGCCAAGTTAGGCATTAGGCCCTTTTCATATGGTCTGGTGGTCCTTTCTGTCTATGACAATGGCTCCGTGTTTAGCCCTGAGGTTTTGGATCTTACTGATGATGACCTTGTTGCAAAGTTTGCTATTGGTGTCTCAATGGTTACCTCACTTTCATTGGCCATCTCTTACCCAACTTTGGCAGCTGCTCCACACATGTTTGTGAATGCCTACAAGAATGTTCTTGCCATTGCAGTGGCAACAGAATATTCCTATCCAGAGGCTGACGAGGTTAAGGAATATCTTAAGGATCCAAGTAAGTTTGCTGTAGCTGCTGCTGCTGCTCCTGCCAATATAACTTATGATGCACCTGCTGCTGCCAAGGAGGAGAAGAAGGAGGAGCCTGAAGAAGAATCTGATGAAGACATTGGTTTTGGTCTTTTTGATGAGTAA 963 0.4434 MAPKPTKAEKKQSYDAKLCQLLDEFSQILIVNADNVGSKQLQNIRSGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFINLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTDDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAIAVATEYSYPEADEVKEYLKDPSKFAVAAAAAPANITYDAPAAAKEEKKEEPEEESDEDIGFGLFDE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0793 320 Gene3D - 114 185 IPR043164 -
Psa2g0793 320 Pfam 60s Acidic ribosomal protein 234 318 - -
Psa2g0793 320 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Psa2g0793 320 CDD Ribosomal_P0_L10e 9 185 - -
Psa2g0793 320 Pfam Ribosomal protein L10 8 108 IPR001790 -
Psa2g0793 320 Gene3D - 6 209 IPR043141 -
Psa2g0793 320 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Psa2g0793 320 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 319 - -
Psa2g0793 320 PIRSF L10E 1 319 IPR030670 GO:0042254
Psa2g0793 320 MobiDBLite consensus disorder prediction 294 320 - -
Psa2g0793 320 MobiDBLite consensus disorder prediction 304 320 - -
Psa2g0793 320 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0793 Psa-Chr2 48579137 48582100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0793 1 318 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 81.132 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0793 K02941 - gmx:100777482 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0793 2 48579137 48582100 Psa2g0793 2 48579137 48582100 ECH