Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0775 ATGGATAAGCACTCACAAATGATCTCAGATGTTGCAGATGCTGACAATTGGAAGAGCATCAAGGCTAGCAGAAACGGTTCTAAGGTGACAGACTTAATGTTTGTCGATGATCTCTTACTTTTTGGAAAAGTGACTGTCAACCAAACTAAGACTATCAAAGGTTTCCTAGAAAAGTTTTGTTCTATTTCTGGGCAGAGGATCAATCATGACAAGTCCAACATCATCTTCTCTCAAAATACCAACTCTACCATTCGGAAGGAAATCATTCATGTAGTCGGGATCAAGGAATCAACTCAACTGGGTATGTACCTTGGTGTTCCTCTTACTGGGAAAAGTCAAAGGCTTCAGGACTACCGGTTTATCATAGAGAAGATAAGAAGAAAACTTTCAATATGGAAAGCCAAGCAACTTTCCATGACTAGAGGAGTGACCCTTGCTAAACAACTCGACCGTGTAAATCCAAAAATATGGCAGGAATGTGCCGGCGATTCCGTCCCTCTTCTGAAGTTGAATTCCAAACTCTATTATTTCCCTCGAGGTCATCTGGAACATGCTTGCCATAACTACCCTGCCACTCAAGCACTCTCGCTCGTTGATCGTTGCCGTCCGTTCACTCTATGCGTTATTTCCGATGTTGACCTCTATGCAGATTCGGAAACTGACGAACTTGTTGCAAAGCTACTATTGATTCCCGTAACTGACGGTAGTGTTGAACCTTCCGAGGCCGACGGTGAAGTTGACGGTGACCAGATTCTTTCCTATGCGAAGACTTTAACCCAATCCGATGCTAATAATGGCAGTGCATTATCCATACCTGTCAAATGCGCTAAAATAATCTTCCCACCACTTGACTACAACACTGAATCTCCGTCTCAAGATGTGTCAGTCACCGACTTTCATGGCGTAGTCTGGAACTTTCGTCACGTGTACATGACGAACCAAACATGTCTTGCAAAAATAAGTTGGAATCTCTACAAGGAGGATAATGCTTTGTGGAAGAAATTTCTTTGGGGTAAATACAATAAAGGCATCATAGGAACTTCCAATGCCAAAAATCATTTCTCAGGCTTGTGGAAAGCTTTGGTTAAGGCTAGGTCCGCTATTAAGAACCAACTCATTTGGAAGGTTGGCAACAGGGAATCTATTGAGGTCTGGAGTGATTGTTGGCTCACACAAGGTCTTAAGCTTAAGAACTACATGATAAATAACAGAAGTGAACCAACTCGCACCAAAGTGAGTGAGCTTATTGATAAGAATCAAAATTGGGATTGGAGAAGGCTCAAAATGTTTTTTAATCAAGACACTCTCGATCGGATAACTGCAATTCTTCCTCCCAGCAGTGACATGAGAAAGGATACTTGTGTTTTAGGAGGCACCAACAATGGTATATTCATTGTTGCTTCTGCTTATAATGGGCTTATGAAGAGTGAAGACGACATCACTAATATGGATTGGAAGGAAACTTGGAAGATTCAAGTGTCAGAAAGGGCCATAAACTTTATTTGA 1506 0.4163 MDKHSQMISDVADADNWKSIKASRNGSKVTDLMFVDDLLLFGKVTVNQTKTIKGFLEKFCSISGQRINHDKSNIIFSQNTNSTIRKEIIHVVGIKESTQLGMYLGVPLTGKSQRLQDYRFIIEKIRRKLSIWKAKQLSMTRGVTLAKQLDRVNPKIWQECAGDSVPLLKLNSKLYYFPRGHLEHACHNYPATQALSLVDRCRPFTLCVISDVDLYADSETDELVAKLLLIPVTDGSVEPSEADGEVDGDQILSYAKTLTQSDANNGSALSIPVKCAKIIFPPLDYNTESPSQDVSVTDFHGVVWNFRHVYMTNQTCLAKISWNLYKEDNALWKKFLWGKYNKGIIGTSNAKNHFSGLWKALVKARSAIKNQLIWKVGNRESIEVWSDCWLTQGLKLKNYMINNRSEPTRTKVSELIDKNQNWDWRRLKMFFNQDTLDRITAILPPSSDMRKDTCVLGGTNNGIFIVASAYNGLMKSEDDITNMDWKETWKIQVSERAINFI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0775 501 CDD B3_DNA 253 331 IPR003340 GO:0003677
Psa2g0775 501 PANTHER AUXIN RESPONSE FACTOR 148 311 - -
Psa2g0775 501 Gene3D - 251 366 IPR015300 -
Psa2g0775 501 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 148 311 IPR044835 GO:0003677|GO:0006355|GO:0009725
Psa2g0775 501 SUPERFAMILY DNA-binding pseudobarrel domain 249 331 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0775 Psa-Chr2 47308598 47313077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0775 147 325 B3 DNA Binding Superfamily AT2G28350 40.314 4.51e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0775 - - mtr:MTR_5g040880 188.734