Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0762 ATGAATGTTTCTATGGTGAGTCTTGTAGCTGGTGAGTCACATGTTTGTGGATTGAATTCAAAAGGGTTTTTAGTTTGTAAAGGAAGTAACAATTTTGGTCAAATTAATGTTCCTAGTCAAGTTAAGCCTTTGGAGTATTCTGATTTAGCGTTAGGAGCTGAACATAGTTGTGCTATTAGAAGATCTAATGGTTCTGTTGTTTGTTGGGGCGGTAAAGGATTGTTTTCTGTTAATGCTACAAAAAGTGTTTCATTCGAGGTTATTGTTTCTGGTTATAATTTTACTTGTGGATTAACAACAAACAATTTTTCTGTTATTTGTTGGGGTCCTGGTTGGTTTAATAACGGTTCGGATTCAGTTCTTAAGCTTCCTTTGCCTCCTATTCTTCCTGGTGTTTGTGTTCAATCTTCTTGTAGTGAATGCGGTATATATCCGCATTCTCAGTATTTGTGTTCTAATTTTGGTAACATTTGTAAGGCGAAACCTTGTTGGCCTCAAATGGAGGTTTTGGCGCCGCCAGAAGGAGAATCACCATTGCAGCCGAGGATGCCTGTTTCGAGATCGAAGACATTGACAAATGGTTTATTGGCATTTCTTATTGTTGGATCAATTGGAACATTTGCTGGTTTTTGCACTGTGGTTTATTGTTTGTGGACTGGTGTTTGTTTTGGTAAGAAGAAAGTTCACAGTTCGGTTCAACCGACGGTAACTAGAGCTGGAAGTTTCAATTGTGTCGCATTTTCGAATTATAGTCCGCCTTCGAGAGCGTCCACTATTAGGCGTCAAAGTTCGAGGATAATGAGGCGTCAGAGAAGCGGAACTTCATCGACAAGACAGCAAGATAAGTCAGAGGAGTTCACTCTTGCTGAGCTTGTGTCAGCCACCAACAATTTCTCACCTGAGAACAAGATTGGTGCTGGAAGCTATGGTGTTGTTTACAAAGGTAAACTCGCCGATGGCCGCGAGGTAGCAATCAAAAGAGGCGAAACCAGTACAAAGACAAAGGTGTTTCAAGAGAAAGAGAGCGCATTCGAGTCCGAATTAGCCTTTTTGTCACGTCTGCATCACAAGCATTTAGTTAGGCTAGTTGGTTTCTGTGACGAGAAAGATGAAAGGCTCTTGGTGTACGAGTTCATGAAGAATGGAGCATTATATGATCATTTGCACGACAAGAATAACGTCGACAAGAATAGTAGTTTATTGAATTCTTGGAAAATGAGGATCAAAATCGCATTGGACGCGTCGCGGGGAATTGAGTATCTCCATAATTACGCAGTTCCATCAATAATTCACAGAGACATAAAGTCGTCAAACATTCTCATCGATGCGAATTGGACTGCGCGAGTGTCTGATTTCGGATTATCATTAATGAGCCCGGATTCTGATCACGACTACATACCAACGAAAGCAGCTGGAACAGTCGGATACATCGATCCCGAATATTACGGTCTAAATGTATTAACATCAAAGAGTGACGTATATGGTCTCGGAGTAGTTTTACTAGAACTACTAACAGGAAAAAGAGCTATATTCAAGAACGACGAAAATGGAGGAACACCGGTGAGTATAGTCGATTTTGCAGTGCCTATAATCATGGAAGGAGAAATAGCGAAAATTTTGGATCAAAGAGTTGAACAACCAGAGATGAATGAAAAAGAAGCAGTGGAATTGGTTGCATATACTGCAATGCATTGTGTGCATTTGGAAGGAAAAGATAGACCAACAATGGCGGATATCGTAGCCAATTTGGAACGTGCTTTCACTCTTTGTGATAGTAGCAGTCATGGCAGCATTTCAAGTGATACAATCTCTGTTGGATCTGAATGA 1827 0.4056 MNVSMVSLVAGESHVCGLNSKGFLVCKGSNNFGQINVPSQVKPLEYSDLALGAEHSCAIRRSNGSVVCWGGKGLFSVNATKSVSFEVIVSGYNFTCGLTTNNFSVICWGPGWFNNGSDSVLKLPLPPILPGVCVQSSCSECGIYPHSQYLCSNFGNICKAKPCWPQMEVLAPPEGESPLQPRMPVSRSKTLTNGLLAFLIVGSIGTFAGFCTVVYCLWTGVCFGKKKVHSSVQPTVTRAGSFNCVAFSNYSPPSRASTIRRQSSRIMRRQRSGTSSTRQQDKSEEFTLAELVSATNNFSPENKIGAGSYGVVYKGKLADGREVAIKRGETSTKTKVFQEKESAFESELAFLSRLHHKHLVRLVGFCDEKDERLLVYEFMKNGALYDHLHDKNNVDKNSSLLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDANWTARVSDFGLSLMSPDSDHDYIPTKAAGTVGYIDPEYYGLNVLTSKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSIVDFAVPIIMEGEIAKILDQRVEQPEMNEKEAVELVAYTAMHCVHLEGKDRPTMADIVANLERAFTLCDSSSHGSISSDTISVGSE* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0762 608 SMART serkin_6 298 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0762 608 ProSiteProfiles Protein kinase domain profile. 298 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0762 608 Gene3D Phosphorylase Kinase; domain 1 258 378 - -
Psa2g0762 608 Gene3D Transferase(Phosphotransferase) domain 1 379 597 - -
Psa2g0762 608 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Psa2g0762 608 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR3-RELATED 2 601 - -
Psa2g0762 608 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 2 601 IPR044815 GO:0004674
Psa2g0762 608 SUPERFAMILY RCC1/BLIP-II 4 114 IPR009091 -
Psa2g0762 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Psa2g0762 608 SUPERFAMILY Protein kinase-like (PK-like) 275 583 IPR011009 -
Psa2g0762 608 MobiDBLite consensus disorder prediction 255 282 - -
Psa2g0762 608 Pfam Protein kinase domain 300 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0762 608 MobiDBLite consensus disorder prediction 268 282 - -
Psa2g0762 608 Gene3D - 1 150 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0762 Psa-Chr2 46878131 46881083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0762 2 608 Receptor kinase-like Gene Family AT3G55950 62.679 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Psa2g0762 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0762 - - gmx:100782916 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0762 2 46878131 46881083 Psa2g0762 2 46878131 46881083 ECH