Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0757 ATGTCGTCCCAAACCGGTAAGCCATTCGACTGGAGCTTCGATCCAGAAACCGAAGATCCAACTCTCCACATGAAAGGCCGCAAATTCTTCTTCTTCATCGCAATCTTCTCCATCATCATCCTCTTCACCACCATCTTCCTCTGCGCCCGATGGATCTTCCGCAACCGCGCTCTTCTATCGCCAAACGCCACTCCGTTGCAGACATTACCATGCTCTTCACCGTCAGAAGGACTCGACGCCGCCGCGATCAAGAAGCTTCCTATCATATTACATCAAACGGATTCTTCCAACCGCGCGTTGGAAGAAACCGAGTGTTGTATCTGTTTAAGCGCGTTTAGAGATGGTGAGAAGCTGAAAGTGTTGCCGGTATGTAATCATTGTTTTCACTGTGAGTGCGTTGACTCGTGGCTCGTGAATCGTTCGAGTTGTCCTTTGTGTAGAGCTTCGCTTAAAACTGATTCATCTTTTCCAAAGATTTTGATTCAAGAACCACCGATAATTTATAATTATCCAATCTGA 519 0.4663 MSSQTGKPFDWSFDPETEDPTLHMKGRKFFFFIAIFSIIILFTTIFLCARWIFRNRALLSPNATPLQTLPCSSPSEGLDAAAIKKLPIILHQTDSSNRALEETECCICLSAFRDGEKLKVLPVCNHCFHCECVDSWLVNRSSCPLCRASLKTDSSFPKILIQEPPIIYNYPI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0757 172 PANTHER RING-H2 FINGER PROTEIN ATL66 2 162 - -
Psa2g0757 172 Pfam Ring finger domain 104 147 IPR001841 -
Psa2g0757 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 155 IPR013083 -
Psa2g0757 172 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 162 IPR044675 -
Psa2g0757 172 SMART ring_2 105 146 IPR001841 -
Psa2g0757 172 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Psa2g0757 172 SUPERFAMILY RING/U-box 95 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0757 Psa-Chr2 46229478 46230483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0757 14 155 C3H Transcription Factor Family AT3G11110 41.781 7.80e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0757 - - gmx:100794554 182.956