Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0739 ATGGCTAGCGTCGAAACTGTTCTAGAATTCCTAAGAAAAAATGGACTATCACAAGCAGAATCAGCTCTCAGAGAAGACATCATTGAAAAGACCAACCTCGCTTCCTTTGACTTCGAGAAATTCTTCTTTCCGATGGTTCCTCCCCCTCCTCCGGTCAAACTCCGGTCCATTTCACGGTCGTCGGAGTTTCCCGCCGACGAAGAAAAGTTCTTCAAATCGAACTCTGTTTCTTCCGATGAACAGTTTGTTAGCATCGGTTCGCCTAGTTCTCGTGTTTCTTCTTTAGAATTTATCAATCCATATGGAATCAATTCATCATCTCAGACGCAGAATGATTCTGAATCTTCATCTGATAGATTGTCACAATTCGGCACAGCGCGTGATTATCATGAATTCGATATGCAACATGAACCGTATTGGTATAATGAAAATGATGATGATTTCATGACTCCTAGTTTTGATGGACCAGATTTCTTTGGGTGTGAAACTGAAGATAAGTTTGTTACAGAAAATCAACGAGAGAATTCTCCCGATCTTCGTTACAACTATAAAGAAATAAGTTTAGAGGGAAATGAGGGTTACGTGGACGAGCGGATGAAGCAATGCATTTGTAATCATTCATCTGTAGTTGATGAAAATGCAAGTTACTCAAAAGATTACTGTCACGGGGCCGAGAAAGACACTGATTCACATAATCGTGAAGTTCCTATAAACTTTAGCTACTCTGATTTGAAGGAAATTGATCGGAATGATTTTCATTTGAAGGATATTATCGATTCTTTTGATTCTTCTCCGCTGCTTACCGTGAAGCGAAGTATTGATTCGTACACTAAAAATGACAGCAATGAGAAATATAAAGATTCGTATGACTTAACTATAACAGTTGCTGAAACGGATCTATCGAATGGGATCGACCCCTATGAAGTAAGAGATGATCCAGAGTTGAGTGAAGGTTTCAGAGATCAGGACGTTGCTGCGGATGTAGAGGATAATAATACCGACGAGCTCTTAAAATACATTCAAGACGATGAATACGAAGTATTTGAGCTAAGAATCGTACATAGAAAGAACAGGACTGGATTCGAAGAAAATAAAGAAGTGCCGATTGTGCTAAATACAGTCATGGCTGGAAGATACTATGTAACAGAATATCTCGGTTCAGCTGCATTCAGTAGGGTTGTTCAAGCACACGATCTTCAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAACGATAAGGATTTCTTTGATCAAAGCCTAGACGAAATCAAGCTTCTAAAACTCGTCAATAAGCATGATCCGGGAGATAAACACCACATATTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATCGTGACCGAACTTCTGCGAGCAAACTTGTATGAATTTCAGAAATTCAACCAAGAATCTGGAGGTGAAGCATATTTTACATTACATAGATTACAGCTCATTACTCGACAGTGTTTGGAGGCTTTACAATATTTGCATAACCTGGGAATCGTTCATTGCGACCTGAAGCCCGAAAACGTTCTAGTAAAAAGTTACAAAAAATGTGAAATCAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACAGACAATTTGTGCCTATATGTACAATCGCGATCTTATAGAGCTCCCGAAGTCATGTTAGGCCTTCAATACGATGAAAAGATTGATATCTGGTCGCTCGGCTGCATTTTGGCTGAGCTATGCTCCGGCGAAGTGCTCTTTCCAAATGATGCTGTCGTGATGATTCTCGCGCGCATGGTTGGAATGTTTGGTCCTTTCGACATGGAGATGTTGGTGAAAGGGCAAGAAACACATAAATACTTCACAAAAGAATATGACATTTACTTTGTAAACGAGGAGACAGATCAACTAGAGTACTTAATTCCAGAAGAGACATCATTGGAGCAGCACCTACGGATCACGGATACCATGTTTATCGACTTTGTCGGATACTTACTTAACACCAACCCGAAAAGAAGACCAACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCTATGTTTACAAGTCCATGTAA 2067 0.3957 MASVETVLEFLRKNGLSQAESALREDIIEKTNLASFDFEKFFFPMVPPPPPVKLRSISRSSEFPADEEKFFKSNSVSSDEQFVSIGSPSSRVSSLEFINPYGINSSSQTQNDSESSSDRLSQFGTARDYHEFDMQHEPYWYNENDDDFMTPSFDGPDFFGCETEDKFVTENQRENSPDLRYNYKEISLEGNEGYVDERMKQCICNHSSVVDENASYSKDYCHGAEKDTDSHNREVPINFSYSDLKEIDRNDFHLKDIIDSFDSSPLLTVKRSIDSYTKNDSNEKYKDSYDLTITVAETDLSNGIDPYEVRDDPELSEGFRDQDVAADVEDNNTDELLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVLNTVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLHRLQLITRQCLEALQYLHNLGIVHCDLKPENVLVKSYKKCEIKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMVGMFGPFDMEMLVKGQETHKYFTKEYDIYFVNEETDQLEYLIPEETSLEQHLRITDTMFIDFVGYLLNTNPKRRPTARQALKHPWLSYVYKSM* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0739 688 CDD PKc_DYRK_like 379 681 - -
Psa2g0739 688 Gene3D Phosphorylase Kinase; domain 1 374 460 - -
Psa2g0739 688 Gene3D Transferase(Phosphotransferase) domain 1 433 681 - -
Psa2g0739 688 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 6 685 - -
Psa2g0739 688 Pfam Protein kinase domain 381 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0739 688 PANTHER DUAL SPECIFICITY PROTEIN KINASE 6 685 - -
Psa2g0739 688 SMART serkin_6 379 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0739 688 ProSiteProfiles Protein kinase domain profile. 379 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0739 688 SUPERFAMILY Protein kinase-like (PK-like) 368 684 IPR011009 -
Psa2g0739 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0739 Psa-Chr2 44374397 44379112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0739 376 676 MAP Kinase Gene Family AT5G19010 31.481 7.95e-32 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Psa2g0739 Pkinase 8.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0739 - - gmx:100795722 1005.36