Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0731 ATGCTTCTTCAAGGAGGAACCGGCATACCTCATATAAAGTGGTCTGGAGTCGAGGGAGACTACAATGTCATGGCTATCGACCTTCTTGGACCCAGTCTAGAAGACTTATTTAACTATTGCAGTAGAAAATTCTCTCTGAAAACAGTGTTGATGCTTGCAGATCAACTAATAAACAGAGTTGAGTATATGCACTCTCGGGGCTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTAAGGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTACGGCCTTGCAAAAAAGTATCGTGATCTTCAGACACATAAGCATATACCATACAAGGAAAACAAGAACCTCACCGGAACTGCTCGATATGCAAGTGTTAATACTCATCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTACTAATGTACTTTTTGAGAGGAAGTCTTCCTTGGCAAGGCTTGAAAGCTGGTACTAAAAAGCAGAAATATAACAAGATAAGTGAAAAGAAAAAGCTTCCTTATGAACCGGCATAA 552 0.3986 MLLQGGTGIPHIKWSGVEGDYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLRGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYKENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYNKISEKKKLPYEPA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0731 183 Gene3D Transferase(Phosphotransferase) domain 1 3 181 - -
Psa2g0731 183 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0731 183 PANTHER CASEIN KINASE-RELATED 1 178 - -
Psa2g0731 183 SMART serkin_6 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0731 183 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 178 - -
Psa2g0731 183 Pfam Protein kinase domain 35 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0731 183 SUPERFAMILY Protein kinase-like (PK-like) 3 179 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0731 Psa-Chr2 43968842 43971298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0731 44 183 MAP Kinase Kinase Kinase AT1G62400 31.429 2.10e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Psa2g0731 Pkinase 9.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0731 K08960 - cpap:110807649 351.288